ENSGALG00000030291


Gallus gallus

Features
Gene ID: ENSGALG00000030291
  
Biological name :IRF9
  
Synonyms : interferon regulatory factor 9 / IRF9
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 10265011
Gene end: 10267614
  
Corresponding Affymetrix probe sets: Gga.158.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046144
NCBI entrez gene - 395243     See in Manteia.
RefSeq - NM_204558
RefSeq Peptide - NP_989889
swissprot - A0A1D5P0G6
Ensembl - ENSGALG00000030291
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 irf10ENSDARG00000027658Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
IRF4 / Q15306* / Q64287* / interferon regulatory factor 4*ENSGALG0000001283044
IRF8 / Q90871 / Interferon regulatory factor 8 / P23611* / Q02556*ENSGALG0000000575737
IRF6 / interferon regulatory factor 6 / O14896* / P97431*ENSGALG0000000140528
IRF5 / Gallus gallus interferon regulatory factor 5 (IRF5), mRNA. / P56477* / Q13568* / interferon regulatory factor 5*ENSGALG0000003998225
IRF7 / interferon regulatory factor 3 / P70434* / Q92985* / interferon regulatory factor 7*ENSGALG0000001429721
IRF4* / Q15306* / Q64287* / interferon regulatory factor 4*ENSGALG0000004391320
IRF2 / Q98925 / Interferon regulatory factor 2 / P14316* / P23906*ENSGALG0000001064215
IRF1 / Q90876 / Interferon regulatory factor 1 / P10914* / P15314*ENSGALG0000000678514


Protein motifs (from Interpro)
Interpro ID Name
 IPR001346  Interferon regulatory factor DNA-binding domain
 IPR008984  SMAD/FHA domain superfamily
 IPR011991  ArsR-like helix-turn-helix domain
 IPR017855  SMAD-like domain superfamily
 IPR019471  Interferon regulatory factor-3
 IPR019817  Interferon regulatory factor, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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