ENSGALG00000012830


Gallus gallus

Features
Gene ID: ENSGALG00000012830
  
Biological name :IRF4
  
Synonyms : IRF4
  
Possible biological names infered from orthology : interferon regulatory factor 4 / Q15306 / Q64287
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 66654456
Gene end: 66724634
  
Corresponding Affymetrix probe sets: Gga.4374.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020897
Ensembl peptide - ENSGALP00000036413
NCBI entrez gene - 374179     See in Manteia.
RefSeq - XM_015282162
RefSeq - NM_204299
RefSeq Peptide - NP_989630
swissprot - Q98TX6
swissprot - Q98TX7
Ensembl - ENSGALG00000012830
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 irf4aENSDARG00000006560Danio rerio
 irf4bENSDARG00000055374Danio rerio
 IRF4ENSG00000137265Homo sapiens
 Irf4ENSMUSG00000021356Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
IRF8 / Q90871 / Interferon regulatory factor 8 / P23611* / Q02556*ENSGALG0000000575741
IRF9 / interferon regulatory factor 9 ENSGALG0000003029141
IRF6 / interferon regulatory factor 6 / O14896* / P97431*ENSGALG0000000140529
IRF4* / Q15306* / Q64287* / interferon regulatory factor 4*ENSGALG0000004391329
IRF5 / Gallus gallus interferon regulatory factor 5 (IRF5), mRNA. / P56477* / Q13568* / interferon regulatory factor 5*ENSGALG0000003998228
IRF7 / interferon regulatory factor 3 / P70434* / Q92985* / interferon regulatory factor 7*ENSGALG0000001429722
IRF2 / Q98925 / Interferon regulatory factor 2 / P14316* / P23906*ENSGALG0000001064216
IRF1 / Q90876 / Interferon regulatory factor 1 / P10914* / P15314*ENSGALG0000000678514


Protein motifs (from Interpro)
Interpro ID Name
 IPR001346  Interferon regulatory factor DNA-binding domain
 IPR008984  SMAD/FHA domain superfamily
 IPR011991  ArsR-like helix-turn-helix domain
 IPR017855  SMAD-like domain superfamily
 IPR019471  Interferon regulatory factor-3
 IPR019817  Interferon regulatory factor, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045082 positive regulation of interleukin-10 biosynthetic process ISS
 biological_processGO:0045086 positive regulation of interleukin-2 biosynthetic process ISS
 biological_processGO:0045368 positive regulation of interleukin-13 biosynthetic process ISS
 biological_processGO:0045404 positive regulation of interleukin-4 biosynthetic process ISS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISS
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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