ENSGALG00000032789


Gallus gallus

Features
Gene ID: ENSGALG00000032789
  
Biological name :TBX18
  
Synonyms : T-box transcription factor TBX18 / TBX18
  
Possible biological names infered from orthology : O95935 / T-box 18
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 77511454
Gene end: 77533879
  
Corresponding Affymetrix probe sets: Gga.8518.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047980
Ensembl peptide - ENSGALP00000060553
NCBI entrez gene - 395104     See in Manteia.
RefSeq - NM_204453
RefSeq Peptide - NP_989784
swissprot - A0A1L1RP31
swissprot - A0A1D5P5K9
Ensembl - ENSGALG00000032789
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbx18ENSDARG00000036930Danio rerio
 TBX18ENSG00000112837Homo sapiens
 Tbx18ENSMUSG00000032419Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBX22 / T-box 22 / Q8K402* / Q9Y458*ENSGALG0000000409336
TBX15 / T-box 15 / O70306* / Q96SF7* / T-box transcription factor TBX15 *ENSGALG0000001477630
TBX20 / Q8UW76 / T-box transcription factor TBX20 / Q9UMR3* / Q9ES03* / T-box 20*ENSGALG0000003209728
TBX2 / T-box 2 / Q13207* / Q60707* / T-box transcription factor TBX2 *ENSGALG0000003429726
TBX3 / T-box 3 / O15119* / P70324*ENSGALG0000003604325
TBX1 / T-box 1 / O43435*ENSGALG0000004118224
TBX5 / Q9PWE8 / T-box transcription factor TBX5 / Q99593* / P70326* / T-box 5*ENSGALG0000000825324
TBX4 / T-box 4 / P57082* / P70325*ENSGALG0000000528523
TBX6 / T-box-containing protein TBX6L / O95947* / P70327* / T-box 6* / T-box transcription factor TBX6 *ENSGALG0000000637421
TBX10* / O75333* / Q810F8* / T-box 10* / T-box transcription factor TBX10 *ENSGALG0000003876721


Protein motifs (from Interpro)
Interpro ID Name
 IPR001699  Transcription factor, T-box
 IPR008967  p53-like transcription factor, DNA-binding
 IPR018186  Transcription factor, T-box, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0072001 renal system development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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