ENSGALG00000041182


Gallus gallus

Features
Gene ID: ENSGALG00000041182
  
Biological name :TBX1
  
Synonyms : T-box 1 / TBX1
  
Possible biological names infered from orthology : O43435
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 932231
Gene end: 938578
  
Corresponding Affymetrix probe sets: GgaAffx.1260.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047300
Ensembl peptide - ENSGALP00000056961
Ensembl peptide - ENSGALP00000051898
Ensembl peptide - ENSGALP00000050189
NCBI entrez gene - 771328     See in Manteia.
RefSeq - XM_015275681
swissprot - A0A1D5PVJ0
swissprot - A0A1D5PGH6
swissprot - A0A1D5PBQ9
swissprot - A0A1D5P3P5
Ensembl - ENSGALG00000041182
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbx1ENSDARG00000031891Danio rerio
 TBX1ENSG00000184058Homo sapiens
 Tbx1ENSMUSG00000009097Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBX10* / O75333* / Q810F8* / T-box 10* / T-box transcription factor TBX10 *ENSGALG0000003876740
TBX2 / T-box 2 / Q13207* / Q60707* / T-box transcription factor TBX2 *ENSGALG0000003429733
TBX3 / T-box 3 / O15119* / P70324*ENSGALG0000003604331
TBX20 / Q8UW76 / T-box transcription factor TBX20 / Q9UMR3* / Q9ES03* / T-box 20*ENSGALG0000003209731
TBX18 / T-box transcription factor TBX18 / O95935* / T-box 18*ENSGALG0000003278931
TBX4 / T-box 4 / P57082* / P70325*ENSGALG0000000528530
TBX5 / Q9PWE8 / T-box transcription factor TBX5 / Q99593* / P70326* / T-box 5*ENSGALG0000000825330
TBX22 / T-box 22 / Q8K402* / Q9Y458*ENSGALG0000000409329
TBX6 / T-box-containing protein TBX6L / O95947* / P70327* / T-box 6* / T-box transcription factor TBX6 *ENSGALG0000000637427
TBX15 / T-box 15 / O70306* / Q96SF7* / T-box transcription factor TBX15 *ENSGALG0000001477623


Protein motifs (from Interpro)
Interpro ID Name
 IPR001699  Transcription factor, T-box
 IPR008967  p53-like transcription factor, DNA-binding
 IPR018186  Transcription factor, T-box, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0048538 thymus development IEA
 biological_processGO:0048703 embryonic viscerocranium morphogenesis IEA
 biological_processGO:0060017 parathyroid gland development IEA
 biological_processGO:0060023 soft palate development IEA
 biological_processGO:0060037 pharyngeal system development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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