ENSGALG00000005285


Gallus gallus

Features
Gene ID: ENSGALG00000005285
  
Biological name :TBX4
  
Synonyms : T-box 4 / TBX4
  
Possible biological names infered from orthology : P57082 / P70325
  
Species: Gallus gallus
  
Chr. number: 19
Strand: -1
Band:
Gene start: 7598320
Gene end: 7623190
  
Corresponding Affymetrix probe sets: Gga.489.1.S1_at (Chicken Array)   GgaAffx.3299.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008462
NCBI entrez gene - 373989     See in Manteia.
RefSeq - NM_001030537
RefSeq - XM_015295658
RefSeq Peptide - NP_001025708
swissprot - O93288
Ensembl - ENSGALG00000005285
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbx4ENSDARG00000030058Danio rerio
 TBX4ENSG00000121075Homo sapiens
 Tbx4ENSMUSG00000000094Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBX5 / Q9PWE8 / T-box transcription factor TBX5 / Q99593* / P70326* / T-box 5*ENSGALG0000000825353
TBX2 / T-box 2 / Q13207* / Q60707* / T-box transcription factor TBX2 *ENSGALG0000003429731
TBX3 / T-box 3 / O15119* / P70324*ENSGALG0000003604329
TBX18 / T-box transcription factor TBX18 / O95935* / T-box 18*ENSGALG0000003278926
TBX1 / T-box 1 / O43435*ENSGALG0000004118226
TBX20 / Q8UW76 / T-box transcription factor TBX20 / Q9UMR3* / Q9ES03* / T-box 20*ENSGALG0000003209725
TBX6 / T-box-containing protein TBX6L / O95947* / P70327* / T-box 6* / T-box transcription factor TBX6 *ENSGALG0000000637424
TBX10* / O75333* / Q810F8* / T-box 10* / T-box transcription factor TBX10 *ENSGALG0000003876723
TBX22 / T-box 22 / Q8K402* / Q9Y458*ENSGALG0000000409322
TBX15 / T-box 15 / O70306* / Q96SF7* / T-box transcription factor TBX15 *ENSGALG0000001477617


Protein motifs (from Interpro)
Interpro ID Name
 IPR001699  Transcription factor, T-box
 IPR008967  p53-like transcription factor, DNA-binding
 IPR018186  Transcription factor, T-box, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0002009 morphogenesis of an epithelium IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0010468 regulation of gene expression IMP
 biological_processGO:0030324 lung development IEA
 biological_processGO:0030326 embryonic limb morphogenesis IEA
 biological_processGO:0035108 limb morphogenesis ISS
 biological_processGO:0035116 embryonic hindlimb morphogenesis IMP
 biological_processGO:0035136 forelimb morphogenesis TAS
 biological_processGO:0048705 skeletal system morphogenesis ISS
 biological_processGO:0060174 limb bud formation IMP
 cellular_componentGO:0001725 stress fiber IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005884 actin filament IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030274 LIM domain binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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