ENSDARG00000036930


Danio rerio

Features
Gene ID: ENSDARG00000036930
  
Biological name :tbx18
  
Synonyms : T-box 18 / tbx18
  
Possible biological names infered from orthology : O95935
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 31107685
Gene end: 31118371
  
Corresponding Affymetrix probe sets: Dr.18566.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000094224
NCBI entrez gene - 572713     See in Manteia.
RefSeq - NM_153665
RefSeq Peptide - NP_705951
swissprot - B3DJF0
ZFIN ID - ZDB-GENE-020529-2
Ensembl - ENSDARG00000036930
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBX18ENSGALG00000032789Gallus gallus
 TBX18ENSG00000112837Homo sapiens
 Tbx18ENSMUSG00000032419Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbx15 / T-box 15 / O70306* / Q96SF7* / T-box transcription factor TBX15 *ENSDARG0000000258257
tbx22 / T-box 22 / Q8K402* / Q9Y458*ENSDARG0000009174830
tbx20 / Q9I9K7 / T-box 20 / Q9UMR3* / Q9ES03* / T-box transcription factor TBX20 *ENSDARG0000000515029
tbx1 / Q8AXX2 / T-box 1 / O43435*ENSDARG0000003189125
tbx2b / Q7ZTU9 / T-box 2b / TBX2* / Q60707* / Q13207* / T-box 2* / T-box transcription factor TBX2 *ENSDARG0000000612025
tbx3a / T-box 3a / TBX3* / O15119* / P70324* / T-box 3*ENSDARG0000000221625
tbx2a / T-box 2a / TBX2* / Q60707* / Q13207* / T-box 2* / T-box transcription factor TBX2 *ENSDARG0000001802524
tbx5a / Q9IAK8 / T-box 5a / TBX5* / Q99593* / P70326* / T-box 5*ENSDARG0000002489424
tbx4 / T-box 4 / P57082* / P70325*ENSDARG0000003005824
tbx16 / T-box 16ENSDARG0000000732922
tbx3b / T-box 3bENSDARG0000006150922
tbx6 / Q8JIS6 / T-box 6 / P70327* / O95947* / T-box transcription factor TBX6 *ENSDARG0000001178522
tbx5b / T-box 5b / TBX5* / P70326* / Q99593* / T-box 5*ENSDARG0000009206021


Protein motifs (from Interpro)
Interpro ID Name
 IPR001699  Transcription factor, T-box
 IPR008967  p53-like transcription factor, DNA-binding
 IPR018186  Transcription factor, T-box, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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