ENSGALG00000034024


Gallus gallus

Features
Gene ID: ENSGALG00000034024
  
Biological name :RAPGEF5
  
Synonyms : RAPGEF5 / Rap guanine nucleotide exchange factor 5
  
Possible biological names infered from orthology : Q8C0Q9 / Q92565
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 30714422
Gene end: 30862920
  
Corresponding Affymetrix probe sets: GgaAffx.6905.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047089
Ensembl peptide - ENSGALP00000056384
NCBI entrez gene - 100857462     See in Manteia.
RefSeq - XM_015281856
swissprot - A0A1D5P336
swissprot - A0A1D5PTY4
Ensembl - ENSGALG00000034024
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rapgef5aENSDARG00000075271Danio rerio
 Q92565ENSG00000136237Homo sapiens
 Q8C0Q9ENSMUSG00000041992Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAPGEF4 / Rap guanine nucleotide exchange factor 4 / Q8WZA2* / Q9EQZ6* / Rap guanine nucleotide exchange factor (GEF) 4*ENSGALG0000004369443
RAPGEF3 / Rap guanine nucleotide exchange factor 3 / O95398* / Q8VCC8* / Mus musculus Rap guanine nucleotide exchange factor (GEF) 3 (Rapgef3), transcript variant 4, mRNA.*ENSGALG0000004377536
RAPGEFL1 / Rap guanine nucleotide exchange factor like 1 / Q68EF8* / Q9UHV5*ENSGALG0000003569034
RAPGEF2 / Rap guanine nucleotide exchange factor 2 / Q8CHG7* / Q9Y4G8*ENSGALG0000002024927
Q8TEU7* / RAPGEF6* / AC008695.1* / Rap guanine nucleotide exchange factor 6* / Rap guanine nucleotide exchange factor (GEF) 6*ENSGALG0000002989627
RASGEF1C / RasGEF domain family member 1C / Q8N431* / Q9D300* / Ras-GEF domain-containing family member 1C *ENSGALG0000000607614
RASGRP3 / RAS guanyl releasing protein 3 / Q8IV61*ENSGALG0000001043514
RASGEF1A / RasGEF domain family member 1A / Q8N9B8*ENSGALG0000000252512
RASGRP1 / RAS guanyl releasing protein 1 / O95267* / Q9Z1S3*ENSGALG0000000974011
Q0VAM2* / Q8JZL7* / RASGEF1B* / RasGEF domain family member 1B* / Ras-GEF domain-containing family member 1B *ENSGALG000000109035


Protein motifs (from Interpro)
Interpro ID Name
 IPR000591  DEP domain
 IPR000651  Ras-like guanine nucleotide exchange factor, N-terminal
 IPR001895  Ras guanine-nucleotide exchange factors catalytic domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR019804  Ras guanine-nucleotide exchange factor, conserved site
 IPR023578  Ras guanine nucleotide exchange factor domain superfamily
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007264 small GTPase mediated signal transduction IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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