ENSGALG00000041775


Gallus gallus

Features
Gene ID: ENSGALG00000041775
  
Biological name :ESRRB
  
Synonyms : ESRRB / estrogen related receptor beta
  
Possible biological names infered from orthology : O95718 / Q61539 / Steroid hormone receptor ERR2
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 38681505
Gene end: 38799468
  
Corresponding Affymetrix probe sets: GgaAffx.6552.2.S1_s_at (Chicken Array)   GgaAffx.6552.5.S1_at (Chicken Array)   GgaAffx.6552.5.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044362
Ensembl peptide - ENSGALP00000050866
NCBI entrez gene - 771938     See in Manteia.
RefSeq - XM_015287714
RefSeq - XM_015287712
RefSeq - XM_015287713
RefSeq - XM_015287709
RefSeq - XM_015287711
swissprot - A0A1D5PDM1
swissprot - A0A1D5NVI7
Ensembl - ENSGALG00000041775
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 esrrbENSDARG00000100847Danio rerio
 ESRRBENSG00000119715Homo sapiens
 EsrrbENSMUSG00000021255Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ESRRG / estrogen-related receptor gamma / P62508* / P62509* / Mus musculus estrogen-related receptor gamma (Esrrg), transcript variant 5, mRNA.*ENSGALG0000000964580
ESR1 / estrogen receptor / P03372* / P19785* / estrogen receptor 1*ENSGALG0000001297334
ESR2 / estrogen receptor beta / O08537* / Q92731* / estrogen receptor 2*ENSGALG0000001180132
NR3C2 / mineralocorticoid receptor / P08235* / nuclear receptor subfamily 3 group C member 2*ENSGALG0000001003528
NR3C1 / glucocorticoid receptor / P04150* / nuclear receptor subfamily 3 group C member 1*ENSGALG0000003299226
NR4A3 / nuclear receptor subfamily 4 group A member 3 / Q92570* / Q9QZB6*ENSGALG0000001356826
NR4A2 / nuclear receptor subfamily 4 group A member 2 / P43354* / Q06219*ENSGALG0000001253826
PGR / progesterone receptor / P06401* / Q00175*ENSGALG0000001719524
AR / androgen receptor / P10275* / P19091*ENSGALG0000003087922


Protein motifs (from Interpro)
Interpro ID Name
 IPR000536  Nuclear hormone receptor, ligand-binding domain
 IPR001628  Zinc finger, nuclear hormone receptor-type
 IPR001723  Nuclear hormone receptor
 IPR013088  Zinc finger, NHR/GATA-type
 IPR024178  Oestrogen receptor/oestrogen-related receptor
 IPR027289  Oestrogen-related receptor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0019827 stem cell population maintenance IEA
 biological_processGO:0043401 steroid hormone mediated signaling pathway IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0005496 steroid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Nuclear Receptor transcription pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr