ENSMUSG00000027519


Mus musculus

Features
Gene ID: ENSMUSG00000027519
  
Biological name :Rab22a
  
Synonyms : P35285 / Rab22a / RAB22A, member RAS oncogene family
  
Possible biological names infered from orthology : Q9UL26
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: H3
Gene start: 173659760
Gene end: 173707343
  
Corresponding Affymetrix probe sets: 10479063 (MoGene1.0st)   1424503_at (Mouse Genome 430 2.0 Array)   1424504_at (Mouse Genome 430 2.0 Array)   1451379_at (Mouse Genome 430 2.0 Array)   1454988_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000104738
Ensembl peptide - ENSMUSP00000122799
Ensembl peptide - ENSMUSP00000029024
NCBI entrez gene - 19334     See in Manteia.
MGI - MGI:105072
RefSeq - NM_024436
RefSeq - XM_017316603
RefSeq Peptide - NP_077756
swissprot - D6RFT6
swissprot - P35285
swissprot - Q0PD34
swissprot - A2ARZ7
Ensembl - ENSMUSG00000027519
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab22aENSDARG00000015807Danio rerio
 RAB22AENSGALG00000007554Gallus gallus
 Q9UL26ENSG00000124209Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rab31 / RAB31, member RAS oncogene family / Q13636*ENSMUSG0000005651571
Rab5c / P35278 / RAB5C, member RAS oncogene family / P51148*ENSMUSG0000001917349
Rab5a / Q9CQD1 / Ras-related protein Rab-5A / P20339* / RAB5A, member RAS oncogene family*ENSMUSG0000001783148
Rab5b / P61021 / RAB5B, member RAS oncogene family / P61020*ENSMUSG0000000071148
Rab21 / P35282 / RAB21, member RAS oncogene family / Q9UL25*ENSMUSG0000002013243
Rab17 / P35292 / Ras-related protein Rab-17 / Q9H0T7* / RAB17, member RAS oncogene family*ENSMUSG0000002630436
Rab20 / P35295 / Ras-related protein Rab-20 / Q9NX57* / RAB20, member RAS oncogene family*ENSMUSG0000003150431
Q8CFP6 / Dnajc27 / DnaJ homolog subfamily C member 27 / Q9NZQ0* / DnaJ heat shock protein family (Hsp40) member C27*ENSMUSG0000002065728


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0007032 endosome organization IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0097494 regulation of vesicle size IEA
 cellular_componentGO:0001726 ruffle IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005769 early endosome IBA
 cellular_componentGO:0005770 late endosome IEA
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0015629 actin cytoskeleton IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030670 phagocytic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0045335 phagocytic vesicle ISS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0019003 GDP binding IEA


Pathways (from Reactome)
Pathway description
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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