ENSMUSG00000038930


Mus musculus

Features
Gene ID: ENSMUSG00000038930
  
Biological name :Rccd1
  
Synonyms : Q8BTU7 / RCC1 domain-containing protein 1 / Rccd1
  
Possible biological names infered from orthology : A6NED2 / RCC1 domain containing 1
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: D2
Gene start: 80293229
Gene end: 80324454
  
Corresponding Affymetrix probe sets: 10564877 (MoGene1.0st)   1456411_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000048043
Ensembl peptide - ENSMUSP00000113273
Ensembl peptide - ENSMUSP00000121884
NCBI entrez gene - 269955     See in Manteia.
MGI - MGI:2444156
RefSeq - XM_017322294
RefSeq - NM_173445
RefSeq - XM_006540928
RefSeq - XM_006540929
RefSeq - XM_006540930
RefSeq - XM_006540926
RefSeq Peptide - NP_775621
swissprot - Q8BTU7
swissprot - D3Z1Y2
Ensembl - ENSMUSG00000038930
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RCCD1ENSG00000166965Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Herc2 / Q4U2R1 / E3 ubiquitin-protein ligase HERC2 / O95714* / HECT and RLD domain containing E3 ubiquitin protein ligase 2*ENSMUSG0000003045131
Herc1 / HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 / Q15751*ENSMUSG0000003866428
Herc3 / HECT and RLD domain containing E3 ubiquitin protein ligase 3 / Q15034*ENSMUSG0000002980420
Herc4 / Q6PAV2 / Probable E3 ubiquitin-protein ligase HERC4 / Q5GLZ8* / HECT and RLD domain containing E3 ubiquitin protein ligase 4*ENSMUSG0000002006420
Herc6 / F2Z461 / E3 ISG15--protein ligase Herc6 / Q8IVU3* / HECT and RLD domain containing E3 ubiquitin protein ligase family member 6*ENSMUSG0000002979819
Hectd3 / Q3U487 / E3 ubiquitin-protein ligase HECTD3 / Q5T447* / HECT domain E3 ubiquitin protein ligase 3*ENSMUSG0000004686110
Hectd2 / Q8CDU6 / Probable E3 ubiquitin-protein ligase HECTD2 / Q5U5R9* / HECT domain E3 ubiquitin protein ligase 2*ENSMUSG000000411804
Ube3a / O08759 / ubiquitin protein ligase E3A / Q05086*ENSMUSG000000253263


Protein motifs (from Interpro)
Interpro ID Name
 IPR000408  Regulator of chromosome condensation, RCC1
 IPR009091  Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0005886 plasma membrane ISO
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr