ENSMUSG00000052496


Mus musculus

Features
Gene ID: ENSMUSG00000052496
  
Biological name :Pkdrej
  
Synonyms : Pkdrej / polycystin family receptor for egg jelly
  
Possible biological names infered from orthology : Q9NTG1
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: E2
Gene start: 85814670
Gene end: 85821734
  
Corresponding Affymetrix probe sets: 10431226 (MoGene1.0st)   1422244_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000086352
NCBI entrez gene - 18766     See in Manteia.
MGI - MGI:1338786
RefSeq - NM_011105
RefSeq Peptide - NP_035235
swissprot - F8VQF3
Ensembl - ENSMUSG00000052496
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000039133Gallus gallus
 PKDREJENSG00000130943Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pkd1l2ENSMUSG0000003441622
Pkd1 / O08852 / Polycystin-1 / P98161* / polycystin 1, transient receptor potential channel interacting*ENSMUSG0000003285517
Pkd1l1 / polycystin 1 like 1, transient receptor potential channel interacting / Q8TDX9*ENSMUSG0000004663415
Pkd1l3 / Q2EG98 / Polycystic kidney disease protein 1-like 3 / Q7Z443* / polycystin 1 like 3, transient receptor potential channel interacting*ENSMUSG0000004882715
A2A259 / Pkd2l1 / Polycystic kidney disease 2-like 1 protein / Q9P0L9* / polycystin 2 like 1, transient receptor potential cation channel*ENSMUSG000000375786
Pkd2 / O35245 / Polycystin-2 / Q13563* / polycystin 2, transient receptor potential cation channel*ENSMUSG000000344626
Pkd2l2 / Q9JLG4 / Polycystic kidney disease 2-like 2 protein / Q9NZM6* / polycystin 2 like 2, transient receptor potential cation channel*ENSMUSG000000145035


Protein motifs (from Interpro)
Interpro ID Name
 IPR001024  PLAT/LH2 domain
 IPR002859  PKD/REJ-like domain
 IPR003915  Polycystic kidney disease type 2 protein
 IPR013122  Polycystin cation channel, PKD1/PKD2
 IPR014010  REJ domain
 IPR023298  P-type ATPase, transmembrane domain superfamily
 IPR036392  PLAT/LH2 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0003666 impaired sperm capacitation "anomaly in the change undergone by spermatozoa in the female genital tract that enables them to penetrate and fertilize an egg" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator, J:96669]
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Allelic Composition: Nedd4Gt(XB786)Byg/Nedd4Gt(XB786)Byg
Genetic Background: involves: 129P2/OlaHsd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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