Manteia

ENSMUSG00000060992

Mus musculus

Features

Gene ID:	ENSMUSG00000060992

Biological name :	Copz1

Synonyms :	Coatomer subunit zeta-1 / Copz1 / P61924

Possible biological names infered from orthology :	coatomer protein complex subunit zeta 1 / P61923

Species:	Mus musculus

Chr. number:	15
Strand:	1
Band:	F3
Gene start:	103272714
Gene end:	103299868

Corresponding Affymetrix probe sets:	10427323 (MoGene1.0st) 1447834_at (Mouse Genome 430 2.0 Array) 1451825_a_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000097738 Ensembl peptide - ENSMUSP00000154922 Ensembl peptide - ENSMUSP00000155674 NCBI entrez gene - 56447 See in Manteia. MGI - MGI:1929063 RefSeq - XM_006521211 RefSeq - NM_019817 RefSeq Peptide - NP_062791 swissprot - P61924 swissprot - Q542M2 swissprot - Q8R3M1 Ensembl - ENSMUSG00000060992

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
Copz2 / Q9JHH9 / Coatomer subunit zeta-2 / Q9P299* / coatomer protein complex subunit zeta 2*	ENSMUSG00000018672	73

Protein motifs (from Interpro)

Interpro ID	Name
IPR000804	Clathrin adaptor complex, small chain
IPR011012	Longin-like domain superfamily
IPR022775	AP complex, mu/sigma subunit

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006886	intracellular protein transport	IEA
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport	IEA
biological_process	GO:0015031	protein transport	IEA
biological_process	GO:0016192	vesicle-mediated transport	IEA
biological_process	GO:1901998	toxin transport	IMP
cellular_component	GO:0000139	Golgi membrane	IEA
cellular_component	GO:0005737	cytoplasm	IEA
cellular_component	GO:0005794	Golgi apparatus	IEA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0030117	membrane coat	IEA
cellular_component	GO:0030126	COPI vesicle coat	IEA
cellular_component	GO:0030663	COPI-coated vesicle membrane	IEA
cellular_component	GO:0031410	cytoplasmic vesicle	IEA
molecular_function	GO:0003674	molecular_function	ND

Pathways (from Reactome)

Pathway description

COPI-mediated anterograde transport

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID	Name	Interaction type
ENSMUSG00000026553	Copa / Q8CIE6 / Coatomer subunit alpha Xenin Proxenin / P53621* / coatomer protein complex subunit alpha*	/ complex
ENSMUSG00000024870	Rab1b / Q9D1G1 / RAB1B, member RAS oncogene family / Q9H0U4*	/ complex / reaction
ENSMUSG00000021877	Arf4 / P61750 / ADP-ribosylation factor 4 / P18085*	/ reaction / complex
ENSMUSG00000029407	Uso1 / Q9Z1Z0 / USO1 vesicle docking factor / O60763* / USO1 vesicle transport factor*	/ complex / reaction
ENSMUSG00000032458	Copb2 / O55029 / Coatomer subunit beta / P35606* / coatomer protein complex subunit beta 2*	/ complex
ENSMUSG00000030754	Copb1 / Q9JIF7 / Coatomer subunit beta / P53618* / coatomer protein complex subunit beta 1*	/ complex
ENSMUSG00000055681	Cope / O89079 / Coatomer subunit epsilon / O14579* / coatomer protein complex subunit epsilon*	/ complex
ENSMUSG00000025607	Copg2 / Q9QXK3 / Coatomer subunit gamma-2 / Q9UBF2* / coatomer protein complex subunit gamma 2*	/ complex
ENSMUSG00000030058	Copg1 / Q9QZE5 / Coatomer subunit gamma-1 / Q9Y678* / coatomer protein complex subunit gamma 1*	/ complex
ENSMUSG00000032096	Arcn1 / Q5XJY5 / Coatomer subunit delta / P48444* / archain 1*	/ complex

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr