ENSG00000111481


Homo sapiens

Features
Gene ID: ENSG00000111481
  
Biological name :COPZ1
  
Synonyms : coatomer protein complex subunit zeta 1 / COPZ1 / P61923
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: q13.13
Gene start: 54301202
Gene end: 54351849
  
Corresponding Affymetrix probe sets: 217726_at (Human Genome U133 Plus 2.0 Array)   222386_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000449341
Ensembl peptide - ENSP00000449270
Ensembl peptide - ENSP00000449414
Ensembl peptide - ENSP00000262061
Ensembl peptide - ENSP00000410620
Ensembl peptide - ENSP00000447100
Ensembl peptide - ENSP00000448005
Ensembl peptide - ENSP00000448235
Ensembl peptide - ENSP00000448444
Ensembl peptide - ENSP00000448945
Ensembl peptide - ENSP00000448997
Ensembl peptide - ENSP00000449072
Ensembl peptide - ENSP00000449108
NCBI entrez gene - 22818     See in Manteia.
OMIM - 615472
RefSeq - XM_017018997
RefSeq - NM_001271734
RefSeq - NM_001271735
RefSeq - NM_001271736
RefSeq - NM_016057
RefSeq Peptide - NP_001258665
RefSeq Peptide - NP_057141
RefSeq Peptide - NP_001258663
RefSeq Peptide - NP_001258664
swissprot - F8W651
swissprot - P61923
swissprot - A0A024RB72
swissprot - F8VUC5
swissprot - F8VVA7
swissprot - F8VXB1
swissprot - F8VYE0
swissprot - F8VXR1
swissprot - F8VYK5
swissprot - F8VYZ4
swissprot - F8W156
Ensembl - ENSG00000111481
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 copz1ENSDARG00000017844Danio rerio
 COPZ1ENSGALG00000043336Gallus gallus
 Copz1ENSMUSG00000060992Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COPZ2 / Q9P299 / coatomer protein complex subunit zeta 2ENSG0000000524370


Protein motifs (from Interpro)
Interpro ID Name
 IPR000804  Clathrin adaptor complex, small chain
 IPR011012  Longin-like domain superfamily
 IPR022775  AP complex, mu/sigma subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport TAS
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER TAS
 biological_processGO:0006891 intra-Golgi vesicle-mediated transport ISS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:1901998 toxin transport IEA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030117 membrane coat IEA
 cellular_componentGO:0030126 COPI vesicle coat ISS
 cellular_componentGO:0030133 transport vesicle TAS
 cellular_componentGO:0030663 COPI-coated vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000129083 COPB1 / P53618 / coatomer protein complex subunit beta 1  / complex
 ENSG00000122218 COPA / P53621 / coatomer protein complex subunit alpha  / complex
 ENSG00000174903 RAB1B / Q9H0U4 / RAB1B, member RAS oncogene family  / complex / reaction
 ENSG00000107862 GBF1 / Q92538 / golgi brefeldin A resistant guanine nucleotide exchange factor 1  / complex / reaction
 ENSG00000158623 COPG2 / Q9UBF2 / coatomer protein complex subunit gamma 2  / complex
 ENSG00000138768 USO1 / O60763 / USO1 vesicle transport factor  / reaction / complex
 ENSG00000105669 COPE / O14579 / coatomer protein complex subunit epsilon  / complex
 ENSG00000168374 ARF4 / P18085 / ADP ribosylation factor 4  / reaction / complex
 ENSG00000181789 COPG1 / Q9Y678 / coatomer protein complex subunit gamma 1  / complex
 ENSG00000184432 COPB2 / P35606 / coatomer protein complex subunit beta 2  / complex
 ENSG00000095139 ARCN1 / P48444 / archain 1  / complex






 

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