ENSMUSG00000102748


Mus musculus

Features
Gene ID: ENSMUSG00000102748
  
Biological name :Pcdhgb2
  
Synonyms : Pcdhgb2 / protocadherin gamma subfamily B, 2
  
Possible biological names infered from orthology : Q9Y5G2
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: B3
Gene start: 37689828
Gene end: 37841873
  
Corresponding Affymetrix probe sets: 1423628_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000141449
NCBI entrez gene - 93700     See in Manteia.
MGI - MGI:1935170
RefSeq - NM_033575
RefSeq Peptide - NP_291053
swissprot - Q91XX7
Ensembl - ENSMUSG00000102748
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CT737184.2ENSDARG00000112930Danio rerio
 pcdh1g1ENSDARG00000104007Danio rerio
 pcdh1g11ENSDARG00000101665Danio rerio
 pcdh1g13ENSDARG00000098963Danio rerio
 pcdh1g14ENSDARG00000104057Danio rerio
 ENSGALG00000038029Gallus gallus
 Q9Y5G2ENSG00000253910Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcdhgb1 / protocadherin gamma subfamily B, 1 / Q9Y5G3*ENSMUSG0000010303775
Pcdhgb8 / protocadherin gamma subfamily B, 8ENSMUSG0000010308171
Pcdhgb7 / protocadherin gamma subfamily B, 7 / Q9Y5F8*ENSMUSG0000010406370
Pcdhgb5 / protocadherin gamma subfamily B, 5 / Q9Y5G0*ENSMUSG0000010374970
Pcdhgb4 / protocadherin gamma subfamily B, 4 / Q9UN71*ENSMUSG0000010358569
Pcdhgb6 / protocadherin gamma subfamily B, 6 / Q9Y5F9*ENSMUSG0000010308868
Pcdhga12ENSMUSG0000010242852
Pcdhga2 / protocadherin gamma subfamily A, 2ENSMUSG0000010333252
Pcdhga1 / protocadherin gamma subfamily A, 1 / Q9Y5H4*ENSMUSG0000010314452
Pcdhgc5 / protocadherin gamma subfamily C, 5 / Q9Y5F6*ENSMUSG0000010254348
O88689 / Gm42416 / predicted gene, 42416ENSMUSG0000010345846
Pcdhgc4 / protocadherin gamma subfamily C, 4 / Q9Y5F7*ENSMUSG0000002303645
Pcdhb7 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000004506237
Q6PB90 / Pcdhb14 / Protocadherin beta-14 ENSMUSG0000004404337
Pcdhb20 / protocadherin beta 20 / Q9Y5E9* / PCDHB14* / protocadherin beta 14*ENSMUSG0000004619137
Pcdhb12 / protocadherin beta 12 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004345837
Pcdhb5 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000006368737
Pcdhb19 / protocadherin beta 19 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004331337
Pcdhb4 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004568936
Pcdhb3 / protocadherin beta 3 / Q9Y5E6*ENSMUSG0000004549836


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR031904  Cadherin, C-terminal catenin-binding domain
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0007399 nervous system development IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IDA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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