ENSMUSG00000103585


Mus musculus

Features
Gene ID: ENSMUSG00000103585
  
Biological name :Pcdhgb4
  
Synonyms : Pcdhgb4 / protocadherin gamma subfamily B, 4
  
Possible biological names infered from orthology : Q9UN71
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: B3
Gene start: 37720369
Gene end: 37841870
  
Corresponding Affymetrix probe sets: 1423628_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000142227
NCBI entrez gene - 93701     See in Manteia.
MGI - MGI:1935173
RefSeq - NM_033576
RefSeq Peptide - NP_291054
swissprot - Q91XX6
Ensembl - ENSMUSG00000103585
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CT737184.2ENSDARG00000112930Danio rerio
 pcdh1g1ENSDARG00000104007Danio rerio
 pcdh1g11ENSDARG00000101665Danio rerio
 pcdh1g13ENSDARG00000098963Danio rerio
 pcdh1g14ENSDARG00000104057Danio rerio
 ENSGALG00000038029Gallus gallus
 Q9UN71ENSG00000253953Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcdhgb5 / protocadherin gamma subfamily B, 5 / Q9Y5G0*ENSMUSG0000010374982
Pcdhgb1 / protocadherin gamma subfamily B, 1 / Q9Y5G3*ENSMUSG0000010303773
Pcdhgb2 / protocadherin gamma subfamily B, 2 / Q9Y5G2*ENSMUSG0000010274871
Pcdhgb6 / protocadherin gamma subfamily B, 6 / Q9Y5F9*ENSMUSG0000010308871
Pcdhgb8 / protocadherin gamma subfamily B, 8ENSMUSG0000010308171
Pcdhgb7 / protocadherin gamma subfamily B, 7 / Q9Y5F8*ENSMUSG0000010406370
Pcdhga12ENSMUSG0000010242854
Pcdhga2 / protocadherin gamma subfamily A, 2ENSMUSG0000010333252
Pcdhga1 / protocadherin gamma subfamily A, 1 / Q9Y5H4*ENSMUSG0000010314452
Pcdhgc5 / protocadherin gamma subfamily C, 5 / Q9Y5F6*ENSMUSG0000010254349
O88689 / Gm42416 / predicted gene, 42416ENSMUSG0000010345846
Pcdhgc4 / protocadherin gamma subfamily C, 4 / Q9Y5F7*ENSMUSG0000002303645
Pcdhb12 / protocadherin beta 12 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004345837
Pcdhb22 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000007359137
Q6PB90 / Pcdhb14 / Protocadherin beta-14 ENSMUSG0000004404337
Pcdhb6 / Q91XZ4 / Protocadherin beta-6 / Q9Y5E4* / PCDHB5* / protocadherin beta 5*ENSMUSG0000005167837
Pcdhb10 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004565736
Pcdhb7 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000004506236
Pcdhb11 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000005148636
Pcdhb5 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000006368736


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR031904  Cadherin, C-terminal catenin-binding domain
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0007399 nervous system development IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IDA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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