ENSMUSG00000103037


Mus musculus

Features
Gene ID: ENSMUSG00000103037
  
Biological name :Pcdhgb1
  
Synonyms : Pcdhgb1 / protocadherin gamma subfamily B, 1
  
Possible biological names infered from orthology : Q9Y5G3
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: B3
Gene start: 37680233
Gene end: 37841870
  
Corresponding Affymetrix probe sets: 1423628_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000141348
NCBI entrez gene - 93699     See in Manteia.
MGI - MGI:1935169
RefSeq - NM_033574
RefSeq Peptide - NP_291052
swissprot - Q91XX8
Ensembl - ENSMUSG00000103037
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CT737184.2ENSDARG00000112930Danio rerio
 pcdh1g1ENSDARG00000104007Danio rerio
 pcdh1g11ENSDARG00000101665Danio rerio
 pcdh1g13ENSDARG00000098963Danio rerio
 pcdh1g14ENSDARG00000104057Danio rerio
 ENSGALG00000038029Gallus gallus
 Q9Y5G3ENSG00000254221Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcdhgb2 / protocadherin gamma subfamily B, 2 / Q9Y5G2*ENSMUSG0000010274876
Pcdhgb4 / protocadherin gamma subfamily B, 4 / Q9UN71*ENSMUSG0000010358572
Pcdhgb7 / protocadherin gamma subfamily B, 7 / Q9Y5F8*ENSMUSG0000010406371
Pcdhgb8 / protocadherin gamma subfamily B, 8ENSMUSG0000010308171
Pcdhgb5 / protocadherin gamma subfamily B, 5 / Q9Y5G0*ENSMUSG0000010374971
Pcdhgb6 / protocadherin gamma subfamily B, 6 / Q9Y5F9*ENSMUSG0000010308870
Pcdhga12ENSMUSG0000010242853
Pcdhga2 / protocadherin gamma subfamily A, 2ENSMUSG0000010333252
Pcdhga1 / protocadherin gamma subfamily A, 1 / Q9Y5H4*ENSMUSG0000010314451
Pcdhgc5 / protocadherin gamma subfamily C, 5 / Q9Y5F6*ENSMUSG0000010254349
O88689 / Gm42416 / predicted gene, 42416ENSMUSG0000010345848
Pcdhgc4 / protocadherin gamma subfamily C, 4 / Q9Y5F7*ENSMUSG0000002303646
Q6PB90 / Pcdhb14 / Protocadherin beta-14 ENSMUSG0000004404338
Pcdhb4 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004568937
Pcdhb20 / protocadherin beta 20 / Q9Y5E9* / PCDHB14* / protocadherin beta 14*ENSMUSG0000004619137
Pcdhb8 / Q91XZ2 / Protocadherin beta-8 / Q9Y5E4* / PCDHB5* / protocadherin beta 5*ENSMUSG0000004587637
Pcdhb2 / protocadherin beta 2 / Q9Y5E7*ENSMUSG0000005159937
Pcdhb9 / protocadherin beta 9 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000005124237
Pcdhb12 / protocadherin beta 12 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004345837
Pcdhb3 / protocadherin beta 3 / Q9Y5E6*ENSMUSG0000004549837


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR031904  Cadherin, C-terminal catenin-binding domain
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0007399 nervous system development IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IDA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030426 growth cone IDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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