ENSMUSG00000100210


Mus musculus

Features
Gene ID: ENSMUSG00000100210
  
Biological name :Hist1h3f
  
Synonyms : Hist1h3f / Histone H3.2 / P84228
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: A3.1
Gene start: 23544052
Gene end: 23545312
  
Corresponding Affymetrix probe sets: 10403941 (MoGene1.0st)   10404028 (MoGene1.0st)   10404030 (MoGene1.0st)   10404049 (MoGene1.0st)   10404065 (MoGene1.0st)   10408083 (MoGene1.0st)   10408202 (MoGene1.0st)   10408239 (MoGene1.0st)   10408246 (MoGene1.0st)   10494405 (MoGene1.0st)   1431231_at (Mouse Genome 430 2.0 Array)   1460314_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000074994
NCBI entrez gene - 260423     See in Manteia.
MGI - MGI:2448329
RefSeq - NM_013548
RefSeq Peptide - NP_038576
swissprot - B9EI85
swissprot - P84228
Ensembl - ENSMUSG00000100210
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CU302436.5ENSDARG00000114500Danio rerio
 P84229ENSGALG00000035244Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P84228 / Hist1h3b / Histone H3.2 ENSMUSG00000069267100
P84228 / Hist1h3e / Histone H3.2 ENSMUSG00000069273100
P84228 / Hist1h3c / Histone H3.2 / Q71DI3* / HIST2H3D* / histone cluster 2 H3 family member d*ENSMUSG00000069310100
P84228 / Hist2h3b / Histone H3.2 / Q71DI3* / HIST2H3A* / histone cluster 2 H3 family member a*ENSMUSG00000074403100
P84228 / Hist2h3c2 / Histone H3.2 / Q71DI3* / HIST2H3D* / histone cluster 2 H3 family member d*ENSMUSG00000081058100
P84228 / Hist2h3c1 / Histone H3.2 ENSMUSG00000093769100
P84228 / Hist1h3d / Histone H3.2 ENSMUSG00000099583100
P68433 / Hist1h3a / Histone H3.1 / P68431* / HIST1H3F* / histone cluster 1 H3 family member f*ENSMUSG0000006926599
P68433 / Hist1h3g / Histone H3.1 ENSMUSG0000009951799
P68433 / Hist1h3h / Histone H3.1 / P68431* / HIST1H3B* / histone cluster 1 H3 family member b*ENSMUSG0000010135599
P68433 / Hist1h3i / Histone H3.1 ENSMUSG0000010197299
H3f3b / P84244 / Histone H3.3 ENSMUSG0000001655997
H3f3a / P84244 / Histone H3.3 / P84243* / H3 histone family member 3A*ENSMUSG0000006074397
C0HKE2 / C0HKE3 / C0HKE4 / C0HKE5 / C0HKE6 / C0HKE7 / C0HKE8 / C0HKE9 / C0HKE1 / Hist1h2ab / Histone H2A type 1-B ENSMUSG0000006161520
C0HKE2 / C0HKE3 / C0HKE4 / C0HKE5 / C0HKE6 / C0HKE7 / C0HKE8 / C0HKE9 / C0HKE1 / Hist1h2ac / Histone H2A type 1-B ENSMUSG0000006927020
C0HKE2 / C0HKE3 / C0HKE4 / C0HKE5 / C0HKE6 / C0HKE7 / C0HKE8 / C0HKE9 / C0HKE1 / Hist1h2ae / Histone H2A type 1-B ENSMUSG0000006927220
C0HKE2 / C0HKE3 / C0HKE4 / C0HKE5 / C0HKE6 / C0HKE7 / C0HKE8 / C0HKE9 / C0HKE1 / Hist1h2ag / Histone H2A type 1-B ENSMUSG0000006930120
Q8CGP6 / Hist1h2ah / Histone H2A type 1-H / P04908* / HIST1H2AE* / histone cluster 1 H2A family member e*ENSMUSG0000006930220
C0HKE2 / C0HKE3 / C0HKE4 / C0HKE5 / C0HKE6 / C0HKE7 / C0HKE8 / C0HKE9 / C0HKE1 / Hist1h2an / Histone H2A type 1-B ENSMUSG0000006930920
C0HKE2 / C0HKE3 / C0HKE4 / C0HKE5 / C0HKE6 / C0HKE7 / C0HKE8 / C0HKE9 / C0HKE1 / Hist1h2ad / Histone H2A type 1-B ENSMUSG0000007147820


Protein motifs (from Interpro)
Interpro ID Name
 IPR000164  Histone H3/CENP-A
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0000183 chromatin silencing at rDNA TAS
 biological_processGO:0006334 nucleosome assembly IBA
 biological_processGO:0006335 DNA replication-dependent nucleosome assembly ISO
 biological_processGO:0051290 protein heterotetramerization ISO
 biological_processGO:0060968 regulation of gene silencing ISS
 cellular_componentGO:0000228 nuclear chromosome ISO
 cellular_componentGO:0000785 chromatin IDA
 cellular_componentGO:0000786 nucleosome ISO
 cellular_componentGO:0000788 nuclear nucleosome ISO
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0031492 nucleosomal DNA binding IBA
 molecular_functionGO:0045296 cadherin binding ISO
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000000708 Kat2b / Q9JHD1 / Histone acetyltransferase KAT2B / Q92831* / lysine acetyltransferase 2B*  / reaction
 ENSMUSG00000000730 Dnmt3l / Q9CWR8 / DNA (cytosine-5)-methyltransferase 3-like / Q9UJW3* / FP565260.4* / DNA methyltransferase 3 like*  / complex / reaction
 ENSMUSG00000001228 Uhrf1 / Q8VDF2 / ubiquitin-like, containing PHD and RING finger domains, 1 / Q96T88* / ubiquitin like with PHD and ring finger domains 1*  / complex / reaction
 ENSMUSG00000057672 Pkn1 / P70268 / Serine/threonine-protein kinase N1 / Q16512* / protein kinase N1*  / complex / reaction
 ENSMUSG00000053436 Mapk14 / P47811 / Mitogen-activated protein kinase 14 / Q16539*  / reaction
 ENSMUSG00000004099 Dnmt1 / P13864 / DNA (cytosine-5)-methyltransferase 1 / P26358* / DNA methyltransferase 1*  / complex / reaction
 ENSMUSG00000020661 Dnmt3a / O88508 / DNA (cytosine-5)-methyltransferase 3A / Q9Y6K1* / DNA methyltransferase 3 alpha*  / complex / reaction
 ENSMUSG00000017548 Suz12 / Q80U70 / Polycomb protein Suz12 / Q15022* / SUZ12 polycomb repressive complex 2 subunit*  / complex / reaction
 ENSMUSG00000020063 Sirt1 / Q923E4 / NAD-dependent protein deacetylase sirtuin-1 SirtT1 75 kDa fragment / Q96EB6* / sirtuin 1*  / complex / reaction
 ENSMUSG00000013787 Ehmt2 / Q9Z148 / Histone-lysine N-methyltransferase EHMT2 / Q96KQ7* / euchromatic histone lysine methyltransferase 2*  / reaction
 ENSMUSG00000026398 Nr5a2 / P45448 / Nuclear receptor subfamily 5 group A member 2 / O00482*  / complex
 ENSMUSG00000022346 Myc / P01108 / myelocytomatosis oncogene / P01106* / MYC proto-oncogene, bHLH transcription factor*  / complex
 ENSMUSG00000024201 Kdm4b / Q91VY5 / Lysine-specific demethylase 4B / O94953* / lysine demethylase 4B*  / complex / reaction
 ENSMUSG00000030888 Rrp8 / Q9DB85 / Ribosomal RNA-processing protein 8 / O43159* / ribosomal RNA processing 8*  / complex / reaction
 ENSMUSG00000034748 Sirt6 / P59941 / sirtuin 6 / Q8N6T7*  / complex / reaction
 ENSMUSG00000036698 Ago2 / Q8CJG0 / Protein argonaute-2 / Q9UKV8* / argonaute 2, RISC catalytic component*  / complex / reaction
 ENSMUSG00000031353 Rbbp7 / Q60973 / retinoblastoma binding protein 7, chromatin remodeling factor / Q16576* / RB binding protein 7, chromatin remodeling factor*  / complex / reaction
 ENSMUSG00000032577 Q3UMW7 / Mapkapk3 / MAP kinase-activated protein kinase 3 / Q16644* / mitogen-activated protein kinase-activated protein kinase 3*  / reaction
 ENSMUSG00000042557 Sin3a / Q60520 / Mus musculus transcriptional regulator, SIN3A (yeast) (Sin3a), transcript variant 4, mRNA. / Q96ST3* / SIN3 transcription regulator family member A*  / complex
 ENSMUSG00000036893 Ehmt1 / Q5DW34 / Histone-lysine N-methyltransferase EHMT1 / Q9H9B1* / euchromatic histone lysine methyltransferase 1*  / reaction
 ENSMUSG00000049932 H2afx / P27661 / Histone H2AX / P16104* / H2A histone family member X*  / complex
 ENSMUSG00000037876 Jmjd1c / Q69ZK6 / Probable JmjC domain-containing histone demethylation protein 2C / Q15652* / jumonji domain containing 1C*  / reaction
 ENSMUSG00000027478 Dnmt3b / O88509 / DNA (cytosine-5)-methyltransferase 3B / Q9UBC3* / DNA methyltransferase 3 beta*  / complex / reaction
 ENSMUSG00000031885 Cbfb / Q08024 / Core-binding factor subunit beta / Q13951* / core-binding factor beta subunit*  / complex / reaction
 ENSMUSG00000035451 Foxa1 / P35582 / Hepatocyte nuclear factor 3-alpha / P55317* / forkhead box A1*  / complex / reaction
 ENSMUSG00000019768 Esr1 / P19785 / Estrogen receptor / P03372* / estrogen receptor 1*  / complex / reaction
 ENSMUSG00000046532 Ar / P19091 / Androgen receptor / P10275*  / complex / reaction
 ENSMUSG00000052056 Zfp217 / zinc finger protein 217 / O75362* / ZNF217*  / complex
 ENSMUSG00000061062 Gm10093 / HDAC1* / Q13547* / histone deacetylase 1*  / complex
 ENSMUSG00000027678 Ncoa3 / nuclear receptor coactivator 3 / Q9Y6Q9*  / complex
 ENSMUSG00000018476 Kdm6b / Q5NCY0 / Lysine-specific demethylase 6B / O15054* / lysine demethylase 6B*  / reaction
 ENSMUSG00000017146 Brca1 / P48754 / Breast cancer type 1 susceptibility protein homolog / P38398* / BRCA1, DNA repair associated*  / complex / reaction
 ENSMUSG00000018973 Hoxb1 / P17919 / Homeobox protein Hox-B1 / P14653* / homeobox B1*  / complex
 ENSMUSG00000021264 Yy1 / Q00899 / YY1 transcription factor / P25490*  / complex
 ENSMUSG00000022914 Brwd1 / Q921C3 / Bromodomain and WD repeat-containing protein 1 / Q9NSI6* / bromodomain and WD repeat domain containing 1*  / complex / reaction
 ENSMUSG00000028397 Kdm4c / Q8VCD7 / Mus musculus lysine (K)-specific demethylase 4C (Kdm4c), transcript variant 3, mRNA. / Q9H3R0* / lysine demethylase 4C*  / complex / reaction
 ENSMUSG00000029836 Cbx3 / chromobox protein homolog 3 / Q13185* / chromobox 3*  / complex
 ENSMUSG00000037369 Kdm6a / O70546 / Lysine-specific demethylase 6A / O15550* / lysine demethylase 6A*  / complex
 ENSMUSG00000052534 Pbx1 / P41778 / Pre-B-cell leukemia transcription factor 1 / P40424* / PBX homeobox 1*  / complex
 ENSMUSG00000036940 Kdm1a / Q6ZQ88 / Mus musculus lysine (K)-specific demethylase 1A (Kdm1a), transcript variant 3, mRNA. / O60341* / lysine demethylase 1A*  / complex / reaction
 ENSMUSG00000055024 Ep300 / B2RWS6 / Histone acetyltransferase p300 / Q09472* / E1A binding protein p300*  / complex / reaction
 ENSMUSG00000100210 P84228 / Hist1h3f / Histone H3.2   / complex / reaction
 ENSMUSG00000099517 P68433 / Hist1h3g / Histone H3.1   / complex / reaction
 ENSMUSG00000060743 H3f3a / P84244 / Histone H3.3 / P84243* / H3 histone family member 3A*  / complex / reaction
 ENSMUSG00000029687 Ezh2 / Q61188 / Histone-lysine N-methyltransferase EZH2 / Q15910* / enhancer of zeste 2 polycomb repressive complex 2 subunit*  / complex / reaction
 ENSMUSG00000006705 O70477 / Pknox1 / Homeobox protein PKNOX1 / P55347* / PBX/knotted 1 homeobox 1*  / complex
 ENSMUSG00000049300 Prmt6 / Q6NZB1 / protein arginine N-methyltransferase 6 / Q96LA8* / protein arginine methyltransferase 6*  / complex
 ENSMUSG00000015619 Gata3 / P23772 / Mus musculus GATA binding protein 3 (Gata3), transcript variant 3, mRNA. / P23771* / GATA binding protein 3*  / complex / reaction
 ENSMUSG00000060981 P62806 / Hist1h4h / Histone H4   / complex / reaction
 ENSMUSG00000028800 Hdac1 / O09106 / Histone deacetylase 1 / Q13547*  / complex
 ENSMUSG00000057236 Rbbp4 / Q60972 / Histone-binding protein RBBP4 / Q09028* / RB binding protein 4, chromatin remodeling factor*  / complex / reaction
 ENSMUSG00000030619 Eed / Q921E6 / Polycomb protein EED / O75530* / embryonic ectoderm development*  / complex / reaction
 ENSMUSG00000024513 Mbd2 / Q9Z2E1 / Methyl-CpG-binding domain protein 2 / Q9UBB5*  / complex / reaction
 ENSMUSG00000060445 Sycp2 / Q9CUU3 / Synaptonemal complex protein 2 / Q9BX26*  / complex
 ENSMUSG00000053137 Mapk11 / Q9WUI1 / Mitogen-activated protein kinase 11 / Q15759*  / reaction
 ENSMUSG00000041530 Ago1 / Q8CJG1 / Protein argonaute-1 / Q9UL18* / argonaute 1, RISC catalytic component*  / complex / reaction
 ENSMUSG00000009575 Cbx5 / Q61686 / Mus musculus chromobox 5 (Cbx5), transcript variant 4, mRNA. / P45973* / chromobox 5*  / complex / reaction
 ENSMUSG00000039231 O54864 / Suv39h1 / suppressor of variegation 3-9 1 / O43463* / suppressor of variegation 3-9 homolog 1*  / complex / reaction
 ENSMUSG00000051977 Prdm9 / Q96EQ9 / PR domain containing 9 / Q9NQV7* / PR/SET domain 9*  / reaction






 

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