ENSDARG00000001880


Danio rerio

Features
Gene ID: ENSDARG00000001880
  
Biological name :stx3a
  
Synonyms : stx3a / syntaxin 3A
  
Possible biological names infered from orthology : Q13277 / Q64704 / STX3 / syntaxin 3
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 21699129
Gene end: 21751346
  
Corresponding Affymetrix probe sets: Dr.11255.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000140602
Ensembl peptide - ENSDARP00000068197
Ensembl peptide - ENSDARP00000153907
NCBI entrez gene - 393515     See in Manteia.
swissprot - A0A0R4IXG8
swissprot - Q6PHV0
ZFIN ID - ZDB-GENE-040426-1489
Ensembl - ENSDARG00000001880
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STX3ENSG00000166900Homo sapiens
 Stx3ENSMUSG00000041488Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STX3 / zgc:165520 / Q13277* / Q64704* / syntaxin 3*ENSDARG0000005198170
stx2b / syntaxin 2b / STX2* / P32856* / syntaxin 2*ENSDARG0000006821757
stx1b / syntaxin 1B / P61264* / P61266*ENSDARG0000000050356
stx1a / syntaxin 1A (brain) / O35526* / Q16623* / syntaxin 1A*ENSDARG0000005899450
stx4 / syntaxin 4 / Stx4a* / P70452* / Q12846*ENSDARG0000005251838
stx11a / syntaxin 11a / STX11* / O75558* / syntaxin 11*ENSDARG0000004403930
stx2a / syntaxin 2a / STX2* / P32856* / syntaxin 2*ENSDARG0000000461830
stx11b.1 / syntaxin 11b, tandem duplicate 1 / STX11* / O75558* / syntaxin 11*ENSDARG0000002929028
stx11b.2 / syntaxin 11b, tandem duplicate 2 / STX11* / O75558* / syntaxin 11*ENSDARG0000004223128


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR010989  SNARE
 IPR031186  Syntaxin-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0016081 synaptic vesicle docking IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0031629 synaptic vesicle fusion to presynaptic active zone membrane IBA
 biological_processGO:0048278 vesicle docking IBA
 biological_processGO:0061025 membrane fusion IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0008021 synaptic vesicle IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
Other interleukin signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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