ENSDARG00000068217


Danio rerio

Features
Gene ID: ENSDARG00000068217
  
Biological name :stx2b
  
Synonyms : stx2b / syntaxin 2b
  
Possible biological names infered from orthology : P32856 / STX2 / syntaxin 2
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 44211374
Gene end: 44224198
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000089296
Ensembl peptide - ENSDARP00000112766
Ensembl peptide - ENSDARP00000123488
swissprot - E7F2P0
swissprot - E9QC02
swissprot - E9QEQ0
ZFIN ID - ZDB-GENE-091204-424
Ensembl - ENSDARG00000068217
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STX2ENSGALG00000002536Gallus gallus
 STX2ENSG00000111450Homo sapiens
 Stx2ENSMUSG00000029428Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stx3a / syntaxin 3A / STX3* / Q64704* / Q13277* / syntaxin 3*ENSDARG0000000188055
stx1b / syntaxin 1B / P61264* / P61266*ENSDARG0000000050353
STX3 / zgc:165520 / Q13277* / Q64704* / syntaxin 3*ENSDARG0000005198148
stx1a / syntaxin 1A (brain) / O35526* / Q16623* / syntaxin 1A*ENSDARG0000005899447
stx4 / syntaxin 4 / Stx4a* / P70452* / Q12846*ENSDARG0000005251835
stx2a / syntaxin 2a / STX2* / P32856* / syntaxin 2*ENSDARG0000000461830
stx11a / syntaxin 11a / STX11* / O75558* / syntaxin 11*ENSDARG0000004403927
stx11b.1 / syntaxin 11b, tandem duplicate 1 / STX11* / O75558* / syntaxin 11*ENSDARG0000002929027
stx11b.2 / syntaxin 11b, tandem duplicate 2 / STX11* / O75558* / syntaxin 11*ENSDARG0000004223126


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR010989  SNARE
 IPR028671  Syntaxin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0007340 acrosome reaction IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0031629 synaptic vesicle fusion to presynaptic active zone membrane IBA
 biological_processGO:0048278 vesicle docking IBA
 biological_processGO:0061025 membrane fusion IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0008021 synaptic vesicle IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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