ENSDARG00000058994


Danio rerio

Features
Gene ID: ENSDARG00000058994
  
Biological name :stx1a
  
Synonyms : stx1a / syntaxin 1A (brain)
  
Possible biological names infered from orthology : O35526 / Q16623 / syntaxin 1A
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 1734444
Gene end: 1746963
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127800
Ensembl peptide - ENSDARP00000154360
swissprot - X1WC57
ZFIN ID - ZDB-GENE-100802-1
Ensembl - ENSDARG00000058994
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STX1AENSGALG00000041722Gallus gallus
 STX1AENSG00000106089Homo sapiens
 Stx1aENSMUSG00000007207Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stx1b / syntaxin 1B / P61264* / P61266*ENSDARG0000000050361
stx2b / syntaxin 2b / STX2* / P32856* / syntaxin 2*ENSDARG0000006821749
stx3a / syntaxin 3A / STX3* / Q64704* / Q13277* / syntaxin 3*ENSDARG0000000188049
STX3 / zgc:165520 / Q13277* / Q64704* / syntaxin 3*ENSDARG0000005198147
stx4 / syntaxin 4 / Stx4a* / P70452* / Q12846*ENSDARG0000005251840
stx11a / syntaxin 11a / STX11* / O75558* / syntaxin 11*ENSDARG0000004403930
stx2a / syntaxin 2a / STX2* / P32856* / syntaxin 2*ENSDARG0000000461828
stx11b.1 / syntaxin 11b, tandem duplicate 1 / STX11* / O75558* / syntaxin 11*ENSDARG0000002929026
stx11b.2 / syntaxin 11b, tandem duplicate 2 / STX11* / O75558* / syntaxin 11*ENSDARG0000004223125


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR010989  SNARE
 IPR028669  Syntaxin 1A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0017157 regulation of exocytosis IEA
 biological_processGO:0061025 membrane fusion IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000149 SNARE binding IEA
 molecular_functionGO:0005484 SNAP receptor activity IEA


Pathways (from Reactome)
Pathway description
Glutamate Neurotransmitter Release Cycle
Acetylcholine Neurotransmitter Release Cycle
Other interleukin signaling
LGI-ADAM interactions
GABA synthesis, release, reuptake and degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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