ENSDARG00000029290


Danio rerio

Features
Gene ID: ENSDARG00000029290
  
Biological name :stx11b.1
  
Synonyms : stx11b.1 / syntaxin 11b, tandem duplicate 1
  
Possible biological names infered from orthology : O75558 / STX11 / syntaxin 11
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 26538137
Gene end: 26541177
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000045396
NCBI entrez gene - 393836     See in Manteia.
RefSeq - NM_200862
RefSeq Peptide - NP_957156
swissprot - Q6P5J5
ZFIN ID - ZDB-GENE-040426-1893
Ensembl - ENSDARG00000029290
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000011673Gallus gallus
 STX11ENSG00000135604Homo sapiens
 Stx11ENSMUSG00000039232Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stx11b.2 / syntaxin 11b, tandem duplicate 2 / STX11* / O75558* / syntaxin 11*ENSDARG0000004223160
stx11a / syntaxin 11a / STX11* / O75558* / syntaxin 11*ENSDARG0000004403946
stx1b / syntaxin 1B / P61264* / P61266*ENSDARG0000000050329
stx2b / syntaxin 2b / STX2* / P32856* / syntaxin 2*ENSDARG0000006821728
stx3a / syntaxin 3A / STX3* / Q64704* / Q13277* / syntaxin 3*ENSDARG0000000188027
stx1a / syntaxin 1A (brain) / O35526* / Q16623* / syntaxin 1A*ENSDARG0000005899426
STX3 / zgc:165520 / Q13277* / Q64704* / syntaxin 3*ENSDARG0000005198125
stx4 / syntaxin 4 / Stx4a* / P70452* / Q12846*ENSDARG0000005251825
stx2a / syntaxin 2a / STX2* / P32856* / syntaxin 2*ENSDARG0000000461818


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR010989  SNARE


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0031629 synaptic vesicle fusion to presynaptic active zone membrane IBA
 biological_processGO:0048278 vesicle docking IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0008021 synaptic vesicle IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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