ENSDARG00000020107


Danio rerio

Features
Gene ID: ENSDARG00000020107
  
Biological name :usp2a
  
Synonyms : ubiquitin specific peptidase 2a / usp2a
  
Possible biological names infered from orthology : O75604 / O88623 / ubiquitin specific peptidase 2 / USP2
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 20900627
Gene end: 20939579
  
Corresponding Affymetrix probe sets: Dr.14438.1.A1_at (Zebrafish Array)   NM_001008574_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000119800
Ensembl peptide - ENSDARP00000126710
Ensembl peptide - ENSDARP00000126799
Ensembl peptide - ENSDARP00000126829
Ensembl peptide - ENSDARP00000126833
NCBI entrez gene - 494031     See in Manteia.
RefSeq - NM_001008574
RefSeq - XM_005157516
RefSeq Peptide - NP_001008574
swissprot - R4GE00
swissprot - R4GE86
swissprot - R4GEC0
swissprot - R4GEB6
swissprot - F1R2P1
ZFIN ID - ZDB-GENE-041212-59
Ensembl - ENSDARG00000020107
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 USP2ENSGALG00000006755Gallus gallus
 USP2ENSG00000036672Homo sapiens
 Usp2ENSMUSG00000032010Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
usp2b / ubiquitin specific peptidase 2b / USP2* / O75604* / O88623* / ubiquitin specific peptidase 2*ENSDARG0000007412080
usp21 / ubiquitin specific peptidase 21 / Q9UK80*ENSDARG0000009428041
usp8 / ubiquitin specific peptidase 8 / P40818* / Q80U87*ENSDARG0000006371938
usp33 / A5PMR2 / ubiquitin specific peptidase 33 / Q8R5K2* / Q8TEY7*ENSDARG0000001616332
usp20 / A5PN09 / ubiquitin specific peptidase 20 / Q9Y2K6*ENSDARG0000002750132
usp45 / ubiquitin specific peptidase 45 / Q70EL2* / Q8K387* / ubiquitin specific petidase 45*ENSDARG0000007501330
usp16 / A8HAL1 / ubiquitin specific peptidase 16 / Q99LG0* / Q9Y5T5*ENSDARG0000006063330


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
TNFR1-induced proapoptotic signaling
Regulation of TNFR1 signaling
TNFR1-induced NFkappaB signaling pathway
Ub-specific processing proteases
Regulation of TP53 Degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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