ENSDARG00000074120


Danio rerio

Features
Gene ID: ENSDARG00000074120
  
Biological name :usp2b
  
Synonyms : ubiquitin specific peptidase 2b / usp2b
  
Possible biological names infered from orthology : O75604 / O88623 / ubiquitin specific peptidase 2 / USP2
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 63088740
Gene end: 63109232
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100330
NCBI entrez gene - 564054     See in Manteia.
swissprot - F1RDC7
ZFIN ID - ZDB-GENE-100208-2
Ensembl - ENSDARG00000074120
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 USP2ENSGALG00000006755Gallus gallus
 USP2ENSG00000036672Homo sapiens
 Usp2ENSMUSG00000032010Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
usp2a / ubiquitin specific peptidase 2a / USP2* / O75604* / O88623* / ubiquitin specific peptidase 2*ENSDARG0000002010779
usp21 / ubiquitin specific peptidase 21 / Q9UK80*ENSDARG0000009428040
usp8 / ubiquitin specific peptidase 8 / P40818* / Q80U87*ENSDARG0000006371940
usp45 / ubiquitin specific peptidase 45 / Q70EL2* / Q8K387* / ubiquitin specific petidase 45*ENSDARG0000007501331
usp20 / A5PN09 / ubiquitin specific peptidase 20 / Q9Y2K6*ENSDARG0000002750130
usp16 / A8HAL1 / ubiquitin specific peptidase 16 / Q99LG0* / Q9Y5T5*ENSDARG0000006063330
usp33 / A5PMR2 / ubiquitin specific peptidase 33 / Q8R5K2* / Q8TEY7*ENSDARG0000001616330


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
TNFR1-induced proapoptotic signaling
Regulation of TNFR1 signaling
TNFR1-induced NFkappaB signaling pathway
Ub-specific processing proteases
Regulation of TP53 Degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000106 extension extension decreased thickness , abnormal
Show

 ZFA:0001115 trunk trunk decreased thickness , abnormal
trunk bent , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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