ENSDARG00000035695


Danio rerio

Features
Gene ID: ENSDARG00000035695
  
Biological name :scxa
  
Synonyms : scleraxis bHLH transcription factor a / scxa
  
Possible biological names infered from orthology : Q64124 / Q7RTU7 / scleraxis / scleraxis bHLH transcription factor / SCX
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 3001473
Gene end: 3009570
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000115633
NCBI entrez gene - 100034489     See in Manteia.
RefSeq - NM_001083069
RefSeq Peptide - NP_001076538
swissprot - Q1LXV2
ZFIN ID - ZDB-GENE-060503-414
Ensembl - ENSDARG00000035695
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCXENSG00000260428Homo sapiens
 ScxENSMUSG00000034161Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scxb / scleraxis bHLH transcription factor b / SCX* / Q7RTU7* / Q64124* / scleraxis* / scleraxis bHLH transcription factor*ENSDARG0000001163564
tcf15 / transcription factor 15ENSDARG0000006754450
si:ch211-246m6.4ENSDARG0000004285742
tal1 / O93507 / T-cell acute lymphocytic leukemia 1 / P22091* / P17542* / TAL bHLH transcription factor 1, erythroid differentiation factor*ENSDARG0000001993026
twist1b / twist family bHLH transcription factor 1b / Q8WVJ9* / TWIST1* / TWIST2* / P26687* / Q15672* / twist family bHLH transcription factor 1* / twist family bHLH transcription factor 2*...ENSDARG0000007601024
twist2 / Q15672* / Q8WVJ9* / TWIST1* / P26687* / twist family bHLH transcription factor 2* / twist family bHLH transcription factor 1* / twist basic helix-loop-helix transcription factor 1*...ENSDARG0000007826623
twist1a / twist family bHLH transcription factor 1a / Q8WVJ9* / TWIST1* / TWIST2* / P26687* / Q15672* / twist family bHLH transcription factor 1* / twist family bHLH transcription factor 2*...ENSDARG0000003040223
twist3ENSDARG0000001964622
hand2 / heart and neural crest derivatives expressed 2 / P61296* / Q61039* / Heart- and neural crest derivatives-expressed protein 2 *ENSDARG0000000830521
CABZ01066694.1 / LYL1* / P12980* / P27792* / Protein lyl-1 * / LYL1, basic helix-loop-helix family member*ENSDARG0000011017821
nhlh2 / nescient helix loop helix 2 / NHLH1* / Q02575* / Q64221* / Q02576* / Q02577* / nescient helix-loop-helix 1*ENSDARG0000002549519
tal2 / T-cell acute lymphocytic leukemia 2 / Q16559* / Q62282* / TAL bHLH transcription factor 2*ENSDARG0000004204118


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr