ENSDARG00000044179


Danio rerio

Features
Gene ID: ENSDARG00000044179
  
Biological name :rbms2a
  
Synonyms : rbms2a / RNA binding motif, single stranded interacting protein 2a
  
Possible biological names infered from orthology : Q15434 / Q8VC70 / RBMS2 / RNA binding motif single stranded interacting protein 2
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 1867613
Gene end: 1920517
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000065469
Ensembl peptide - ENSDARP00000142172
NCBI entrez gene - 378458     See in Manteia.
swissprot - A0A140LFZ6
swissprot - E7F112
ZFIN ID - ZDB-GENE-030912-2
Ensembl - ENSDARG00000044179
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBMS2ENSGALG00000038757Gallus gallus
 RBMS2ENSG00000076067Homo sapiens
 Rbms2ENSMUSG00000040043Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rbms2b / RNA binding motif, single stranded interacting protein 2b / RBMS2* / Q8VC70* / Q15434* / RNA binding motif single stranded interacting protein 2*ENSDARG0000005615080
rbms3 / RNA binding motif, single stranded interacting protein / Q6XE24* / Q8BWL5* / RNA binding motif single stranded interacting protein 3*ENSDARG0000004457467
rbms1a / RNA binding motif, single stranded interacting protein 1a / RBMS1* / Q91W59* / P29558* / RNA binding motif single stranded interacting protein 1*ENSDARG0000007402361
RBMS1 (1 of many) / RNA binding motif single stranded interacting protein 1 / RBMS1* / P29558*ENSDARG0000010382338
elavl4 / ELAV like neuron-specific RNA binding protein 4 / P26378* / Q61701* / ELAV like RNA binding protein 4* / Mus musculus ELAV like RNA binding protein 4 (Elavl4), transcript variant 5, mRNA.*ENSDARG0000004563925
elavl2 / ELAV like neuron-specific RNA binding protein 2 / Q12926* / Q60899* / ELAV like RNA binding protein 2* / Mus musculus ELAV like RNA binding protein 1 (Elavl2), transcript variant 5, mRNA.*ENSDARG0000004073225
pabpc4 / poly(A) binding protein, cytoplasmic 4 (inducible form) / Q13310* / P0CB38* / PABPC4L* / poly(A) binding protein cytoplasmic 4* / poly(A) binding protein cytoplasmic 4 like*ENSDARG0000005925924
elavl3 / ELAV like neuron-specific RNA binding protein 3 / Q60900* / Q14576* / ELAV-like protein 3 * / ELAV like RNA binding protein 3*ENSDARG0000001442023
pabpc1a / poly(A) binding protein, cytoplasmic 1a / PABPC1* / Pabpc2* / PABPC3* / Pabpc6* / Q9H361* / P11940* / P29341* / Polyadenylate-binding protein 1 * / poly(A) binding protein cytopla...ENSDARG0000001721923
pabpc1b / poly A binding protein, cytoplasmic 1 b / PABPC1* / Pabpc2* / PABPC3* / Pabpc6* / Q9H361* / P11940* / P29341* / Polyadenylate-binding protein 1 * / poly(A) binding protein cytopla...ENSDARG0000002114022
elavl1a / ELAV like RNA binding protein 1a / Q15717* / P70372* / ELAVL1* / ELAV-like protein 1 * / ELAV like RNA binding protein 1*ENSDARG0000003869521
elavl1b / ELAV like RNA binding protein 1b / Q15717* / P70372* / ELAVL1* / ELAV-like protein 1 * / ELAV like RNA binding protein 1*ENSDARG0000010174421
pabpc1l / poly(A) binding protein, cytoplasmic 1-like / Q4VXU2*ENSDARG0000000259720
puf60a / poly-U binding splicing factor a / PUF60* / Q3UEB3* / Q9UHX1* / poly(U) binding splicing factor 60* / Poly(U)-binding-splicing factor PUF60 *ENSDARG0000003217517
Q6IQE0 / puf60b / poly-U binding splicing factor b / PUF60* / Q3UEB3* / Q9UHX1* / poly(U) binding splicing factor 60* / Poly(U)-binding-splicing factor PUF60 *ENSDARG0000000124117


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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