ENSMUSG00000040043


Mus musculus

Features
Gene ID: ENSMUSG00000040043
  
Biological name :Rbms2
  
Synonyms : Q8VC70 / Rbms2 / RNA-binding motif, single-stranded-interacting protein 2
  
Possible biological names infered from orthology : Q15434
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: D3
Gene start: 128131558
Gene end: 128180297
  
Corresponding Affymetrix probe sets: 10373340 (MoGene1.0st)   1423540_at (Mouse Genome 430 2.0 Array)   1433979_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000089664
Ensembl peptide - ENSMUSP00000096742
NCBI entrez gene - 56516     See in Manteia.
MGI - MGI:1861776
RefSeq - XM_006513900
RefSeq - NM_001039080
RefSeq - NM_019711
RefSeq - XM_006513899
RefSeq Peptide - NP_062685
RefSeq Peptide - NP_001034169
swissprot - Q8VC70
swissprot - E9Q7G6
Ensembl - ENSMUSG00000040043
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbms2aENSDARG00000044179Danio rerio
 rbms2bENSDARG00000056150Danio rerio
 RBMS2ENSGALG00000038757Gallus gallus
 RBMS2ENSG00000076067Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rbms1 / Q91W59 / RNA-binding motif, single-stranded-interacting protein 1 / P29558*ENSMUSG0000002697067
Rbms3 / Q8BWL5 / RNA binding motif, single stranded interacting protein / Q6XE24* / RNA binding motif single stranded interacting protein 3*ENSMUSG0000003960767
Pabpc4 / poly(A) binding protein, cytoplasmic 4 / Q13310*ENSMUSG0000001125725
P29341 / Pabpc1 / Polyadenylate-binding protein 1 ENSMUSG0000002228325
Pabpc2 / P11940* / PABPC1* / poly(A) binding protein cytoplasmic 1*ENSMUSG0000005173224
Pabpc6ENSMUSG0000004617324
Elavl4 / Q61701 / Mus musculus ELAV like RNA binding protein 4 (Elavl4), transcript variant 5, mRNA. / P26378* / ELAV like RNA binding protein 4*ENSMUSG0000002854623
Elavl3 / Q60900 / ELAV-like protein 3 / Q14576* / ELAV like RNA binding protein 3*ENSMUSG0000000341023
Elavl2 / Q60899 / Mus musculus ELAV like RNA binding protein 1 (Elavl2), transcript variant 5, mRNA. / Q12926* / ELAV like RNA binding protein 2*ENSMUSG0000000848923
Elavl1 / P70372 / ELAV-like protein 1 / Q15717* / ELAV like RNA binding protein 1*ENSMUSG0000004002821
Puf60 / Q3UEB3 / Poly(U)-binding-splicing factor PUF60 / Q9UHX1* / poly(U) binding splicing factor 60*ENSMUSG0000000252421
Pabpc1l / poly(A) binding protein, cytoplasmic 1-like / Q4VXU2*ENSMUSG0000005458219
Pabpc4l / poly(A) binding protein cytoplasmic 4 like / P0CB38*ENSMUSG0000009091915
Pabpc5 / poly(A) binding protein cytoplasmic 5 / Q96DU9*ENSMUSG0000003473214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002343  Paraneoplastic encephalomyelitis antigen
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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