ENSMUSG00000008489


Mus musculus

Features
Gene ID: ENSMUSG00000008489
  
Biological name :Elavl2
  
Synonyms : Elavl2 / Mus musculus ELAV like RNA binding protein 1 (Elavl2), transcript variant 5, mRNA. / Q60899
  
Possible biological names infered from orthology : ELAV like RNA binding protein 2 / Q12926
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: C5
Gene start: 91250763
Gene end: 91400785
  
Corresponding Affymetrix probe sets: 10514352 (MoGene1.0st)   1421881_a_at (Mouse Genome 430 2.0 Array)   1421882_a_at (Mouse Genome 430 2.0 Array)   1421883_at (Mouse Genome 430 2.0 Array)   1433052_at (Mouse Genome 430 2.0 Array)   1454454_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000102737
Ensembl peptide - ENSMUSP00000102735
Ensembl peptide - ENSMUSP00000102741
Ensembl peptide - ENSMUSP00000135780
Ensembl peptide - ENSMUSP00000135038
Ensembl peptide - ENSMUSP00000117770
Ensembl peptide - ENSMUSP00000008633
Ensembl peptide - ENSMUSP00000099863
Ensembl peptide - ENSMUSP00000102726
Ensembl peptide - ENSMUSP00000102727
Ensembl peptide - ENSMUSP00000102728
Ensembl peptide - ENSMUSP00000102733
NCBI entrez gene - 15569     See in Manteia.
MGI - MGI:1100887
RefSeq - XM_017319991
RefSeq - NM_207685
RefSeq - NM_207686
RefSeq - XM_006502778
RefSeq - XM_006502779
RefSeq - XM_006502781
RefSeq - XM_006502783
RefSeq - XM_006502784
RefSeq - XM_006502785
RefSeq - XM_006502787
RefSeq - XM_006502788
RefSeq - XM_006502789
RefSeq - XM_006502790
RefSeq - XM_006502791
RefSeq - XM_011240447
RefSeq - XM_011240448
RefSeq - XM_017319987
RefSeq - XM_017319988
RefSeq - XM_017319989
RefSeq - XM_017319990
RefSeq - NM_001177883
RefSeq - NM_001347149
RefSeq - NM_001357188
RefSeq - NM_010486
RefSeq Peptide - NP_001171354
RefSeq Peptide - NP_001334078
RefSeq Peptide - NP_001344117
RefSeq Peptide - NP_001344118
RefSeq Peptide - NP_034616
RefSeq Peptide - NP_997568
RefSeq Peptide - NP_997569
swissprot - Q564D8
swissprot - Q60899
swissprot - B1AXZ6
swissprot - Q80Y51
swissprot - B1AXZ0
swissprot - Q80UJ0
swissprot - B1AXZ5
swissprot - B1AXZ4
swissprot - H3BJL9
swissprot - H3BLG7
swissprot - B1AXZ3
swissprot - Q3UR02
Ensembl - ENSMUSG00000008489
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 elavl2ENSDARG00000040732Danio rerio
 ELAVL2ENSGALG00000015799Gallus gallus
 ELAVL2ENSG00000107105Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Elavl4 / Q61701 / Mus musculus ELAV like RNA binding protein 4 (Elavl4), transcript variant 5, mRNA. / P26378* / ELAV like RNA binding protein 4*ENSMUSG0000002854684
Elavl3 / Q60900 / ELAV-like protein 3 / Q14576* / ELAV like RNA binding protein 3*ENSMUSG0000000341076
Elavl1 / P70372 / ELAV-like protein 1 / Q15717* / ELAV like RNA binding protein 1*ENSMUSG0000004002862
Rbms1 / Q91W59 / RNA-binding motif, single-stranded-interacting protein 1 / P29558*ENSMUSG0000002697026
Rbms3 / Q8BWL5 / RNA binding motif, single stranded interacting protein / Q6XE24* / RNA binding motif single stranded interacting protein 3*ENSMUSG0000003960724
Rbms2 / Q8VC70 / RNA-binding motif, single-stranded-interacting protein 2 / Q15434*ENSMUSG0000004004323
Puf60 / Q3UEB3 / Poly(U)-binding-splicing factor PUF60 / Q9UHX1* / poly(U) binding splicing factor 60*ENSMUSG0000000252421
P29341 / Pabpc1 / Polyadenylate-binding protein 1 ENSMUSG0000002228321
Pabpc6ENSMUSG0000004617321
Pabpc2 / P11940* / PABPC1* / poly(A) binding protein cytoplasmic 1*ENSMUSG0000005173220
Pabpc4 / poly(A) binding protein, cytoplasmic 4 / Q13310*ENSMUSG0000001125720
Pabpc1l / poly(A) binding protein, cytoplasmic 1-like / Q4VXU2*ENSMUSG0000005458220
Pabpc4l / poly(A) binding protein cytoplasmic 4 like / P0CB38*ENSMUSG0000009091913
Pabpc5 / poly(A) binding protein cytoplasmic 5 / Q96DU9*ENSMUSG0000003473213


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002343  Paraneoplastic encephalomyelitis antigen
 IPR006548  Splicing factor ELAV/Hu
 IPR034775  Splicing factor ELAV/Hu, RNA recognition motif 1
 IPR034914  HuB, RNA recognition motif 3
 IPR034999  HuB, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEP
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr