ENSGALG00000015799


Gallus gallus

Features
Gene ID: ENSGALG00000015799
  
Biological name :ELAVL2
  
Synonyms : ELAVL2 / ELAV like RNA binding protein 2
  
Possible biological names infered from orthology : Mus musculus ELAV like RNA binding protein 1 (Elavl2), transcript variant 5, mRNA. / Q12926 / Q60899
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 67421571
Gene end: 67466015
  
Corresponding Affymetrix probe sets: Gga.18415.1.S1_at (Chicken Array)   GgaAffx.10061.1.S1_at (Chicken Array)   GgaAffx.21563.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000040915
NCBI entrez gene - 770158     See in Manteia.
RefSeq - XM_004949538
RefSeq - XM_004949539
RefSeq - XM_004949541
RefSeq - XM_004949542
RefSeq - XM_004949544
RefSeq - XM_004949549
RefSeq - XM_015280735
RefSeq - XM_015280736
RefSeq - XM_015280737
RefSeq - XM_015280739
RefSeq - XM_015280740
RefSeq - XM_004949537
swissprot - R4GFW0
Ensembl - ENSGALG00000015799
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 elavl2ENSDARG00000040732Danio rerio
 ELAVL2ENSG00000107105Homo sapiens
 Elavl2ENSMUSG00000008489Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ELAVL4 / ELAV-like protein 4 / P26378* / Q61701* / ELAV like RNA binding protein 4* / Mus musculus ELAV like RNA binding protein 4 (Elavl4), transcript variant 5, mRNA.*ENSGALG0000001053388
ELAVL1 / ELAV-like protein 1 / P70372* / Q15717* / ELAV like RNA binding protein 1*ENSGALG0000000072666
RBMS1 / RNA binding motif single stranded interacting protein 1 / P29558* / Q91W59*ENSGALG0000001113225
RBMS2 / RNA binding motif single stranded interacting protein 2 / Q15434* / Q8VC70*ENSGALG0000003875725
PUF60 / poly(U)-binding-splicing factor PUF60 / Q3UEB3* / Q9UHX1* / poly(U) binding splicing factor 60*ENSGALG0000003990122
PABPC1 / polyadenylate-binding protein 1 / PABPC3* / Q9H361* / P11940* / P29341* / poly(A) binding protein cytoplasmic 3* / poly(A) binding protein cytoplasmic 1*ENSGALG0000003028022
Q13310* / P0CB38* / PABPC4* / PABPC4L* / poly(A) binding protein cytoplasmic 4* / poly(A) binding protein cytoplasmic 4 like*ENSGALG0000000380021
PABPC1L / poly(A) binding protein cytoplasmic 1 like / Q4VXU2*ENSGALG0000000412319
RBMS3 / RNA binding motif single stranded interacting protein 3 / Q6XE24* / Q8BWL5* / RNA binding motif, single stranded interacting protein*ENSGALG0000001143918
ENSGALG0000003825910


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002343  Paraneoplastic encephalomyelitis antigen
 IPR006548  Splicing factor ELAV/Hu
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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