ENSG00000107105


Homo sapiens

Features
Gene ID: ENSG00000107105
  
Biological name :ELAVL2
  
Synonyms : ELAVL2 / ELAV like RNA binding protein 2 / Q12926
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: p21.3
Gene start: 23690104
Gene end: 23826337
  
Corresponding Affymetrix probe sets: 208427_s_at (Human Genome U133 Plus 2.0 Array)   228260_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000380479
Ensembl peptide - ENSP00000369460
Ensembl peptide - ENSP00000391757
Ensembl peptide - ENSP00000440998
Ensembl peptide - ENSP00000412602
Ensembl peptide - ENSP00000223951
Ensembl peptide - ENSP00000369453
NCBI entrez gene - 1993     See in Manteia.
OMIM - 601673
RefSeq - XM_017014426
RefSeq - XM_011517780
RefSeq - XM_011517783
RefSeq - XM_011517784
RefSeq - XM_011517785
RefSeq - XM_011517786
RefSeq - XM_017014408
RefSeq - XM_017014409
RefSeq - XM_017014410
RefSeq - XM_017014411
RefSeq - XM_017014412
RefSeq - XM_017014413
RefSeq - XM_017014414
RefSeq - XM_017014415
RefSeq - XM_017014416
RefSeq - XM_017014417
RefSeq - XM_017014418
RefSeq - XM_017014419
RefSeq - XM_017014420
RefSeq - XM_017014421
RefSeq - XM_017014422
RefSeq - XM_017014423
RefSeq - XM_017014424
RefSeq - XM_017014425
RefSeq - NM_001171195
RefSeq - NM_001171197
RefSeq - NM_001351458
RefSeq - NM_001351459
RefSeq - NM_001351465
RefSeq - NM_001351467
RefSeq - NM_001351468
RefSeq - NM_001351469
RefSeq - NM_001351470
RefSeq - NM_001351471
RefSeq - NM_001351472
RefSeq - NM_001351473
RefSeq - NM_001351474
RefSeq - NM_001351475
RefSeq - NM_001351476
RefSeq - NM_001351478
RefSeq - NM_004432
RefSeq - XM_005251393
RefSeq - XM_005251394
RefSeq - XM_005251395
RefSeq - XM_006716734
RefSeq - XM_006716735
RefSeq - XM_006716736
RefSeq - XM_011517774
RefSeq - XM_011517776
RefSeq - XM_011517777
RefSeq - XM_011517778
RefSeq - XM_011517779
RefSeq Peptide - NP_001338387
RefSeq Peptide - NP_004423
RefSeq Peptide - NP_001164666
RefSeq Peptide - NP_001164668
RefSeq Peptide - NP_001338384
RefSeq Peptide - NP_001338388
RefSeq Peptide - NP_001338394
RefSeq Peptide - NP_001338396
RefSeq Peptide - NP_001338397
RefSeq Peptide - NP_001338398
RefSeq Peptide - NP_001338399
RefSeq Peptide - NP_001338400
RefSeq Peptide - NP_001338401
RefSeq Peptide - NP_001338402
RefSeq Peptide - NP_001338403
RefSeq Peptide - NP_001338404
RefSeq Peptide - NP_001338405
RefSeq Peptide - NP_001338406
RefSeq Peptide - NP_001338407
swissprot - B1AM48
swissprot - Q12926
swissprot - A0A0A0MRX1
swissprot - C9JB16
Ensembl - ENSG00000107105
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 elavl2ENSDARG00000040732Danio rerio
 ELAVL2ENSGALG00000015799Gallus gallus
 Elavl2ENSMUSG00000008489Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ELAVL4 / P26378 / ELAV like RNA binding protein 4ENSG0000016237490
ELAVL3 / Q14576 / ELAV like RNA binding protein 3ENSG0000019636182
ELAVL1 / Q15717 / ELAV like RNA binding protein 1ENSG0000006604467
RBMS1 / P29558 / RNA binding motif single stranded interacting protein 1ENSG0000015325028
RBMS3 / Q6XE24 / RNA binding motif single stranded interacting protein 3ENSG0000014464227
RBMS2 / Q15434 / RNA binding motif single stranded interacting protein 2ENSG0000007606726
P11940 / PABPC1 / poly(A) binding protein cytoplasmic 1ENSG0000007075623
Q4VXU2 / PABPC1L / poly(A) binding protein cytoplasmic 1 likeENSG0000010110422
PABPC4 / Q13310 / poly(A) binding protein cytoplasmic 4ENSG0000009062122
PUF60 / Q9UHX1 / poly(U) binding splicing factor 60ENSG0000017995022
PABPC3 / Q9H361 / poly(A) binding protein cytoplasmic 3ENSG0000015184622
P0CB38 / PABPC4L / poly(A) binding protein cytoplasmic 4 likeENSG0000025453515
PABPC5 / Q96DU9 / poly(A) binding protein cytoplasmic 5ENSG0000017474015
Q5JQF8 / PABPC1L2A / poly(A) binding protein cytoplasmic 1 like 2AENSG000001862882
Q5JQF8 / PABPC1L2B / poly(A) binding protein cytoplasmic 1 like 2BENSG000001843882


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002343  Paraneoplastic encephalomyelitis antigen
 IPR006548  Splicing factor ELAV/Hu
 IPR034775  Splicing factor ELAV/Hu, RNA recognition motif 1
 IPR034914  HuB, RNA recognition motif 3
 IPR034999  HuB, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006355 regulation of transcription, DNA-templated TAS
 cellular_componentGO:0005654 nucleoplasm TAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003730 mRNA 3"-UTR binding TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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