ENSG00000153250


Homo sapiens

Features
Gene ID: ENSG00000153250
  
Biological name :RBMS1
  
Synonyms : P29558 / RBMS1 / RNA binding motif single stranded interacting protein 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q24.2
Gene start: 160272151
Gene end: 160493794
  
Corresponding Affymetrix probe sets: 203748_x_at (Human Genome U133 Plus 2.0 Array)   207266_x_at (Human Genome U133 Plus 2.0 Array)   209868_s_at (Human Genome U133 Plus 2.0 Array)   215127_s_at (Human Genome U133 Plus 2.0 Array)   225265_at (Human Genome U133 Plus 2.0 Array)   225269_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000386571
Ensembl peptide - ENSP00000386347
Ensembl peptide - ENSP00000387280
Ensembl peptide - ENSP00000389016
Ensembl peptide - ENSP00000294904
Ensembl peptide - ENSP00000376508
NCBI entrez gene - 5937     See in Manteia.
OMIM - 602310
RefSeq - XM_017004626
RefSeq - NM_016836
RefSeq - XM_005246737
RefSeq - XM_005246738
RefSeq - XM_005246739
RefSeq - XM_005246740
RefSeq - XM_005246741
RefSeq - NM_002897
RefSeq Peptide - NP_002888
RefSeq Peptide - NP_058520
swissprot - E7ETU5
swissprot - F6Y5H0
swissprot - P29558
swissprot - E7EPF2
Ensembl - ENSG00000153250
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBMS1 (1 of many)ENSDARG00000103823Danio rerio
 rbms1aENSDARG00000074023Danio rerio
 RBMS1ENSGALG00000011132Gallus gallus
 Rbms1ENSMUSG00000026970Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBMS3 / Q6XE24 / RNA binding motif single stranded interacting protein 3ENSG0000014464276
RBMS2 / Q15434 / RNA binding motif single stranded interacting protein 2ENSG0000007606767
PABPC3 / Q9H361 / poly(A) binding protein cytoplasmic 3ENSG0000015184626
P11940 / PABPC1 / poly(A) binding protein cytoplasmic 1ENSG0000007075626
PABPC4 / Q13310 / poly(A) binding protein cytoplasmic 4ENSG0000009062125
ELAVL2 / Q12926 / ELAV like RNA binding protein 2ENSG0000010710524
ELAVL3 / Q14576 / ELAV like RNA binding protein 3ENSG0000019636123
ELAVL4 / P26378 / ELAV like RNA binding protein 4ENSG0000016237423
Q4VXU2 / PABPC1L / poly(A) binding protein cytoplasmic 1 likeENSG0000010110423
ELAVL1 / Q15717 / ELAV like RNA binding protein 1ENSG0000006604421
PUF60 / Q9UHX1 / poly(U) binding splicing factor 60ENSG0000017995020
P0CB38 / PABPC4L / poly(A) binding protein cytoplasmic 4 likeENSG0000025453515
PABPC5 / Q96DU9 / poly(A) binding protein cytoplasmic 5ENSG0000017474013
Q5JQF8 / PABPC1L2A / poly(A) binding protein cytoplasmic 1 like 2AENSG000001862884
Q5JQF8 / PABPC1L2B / poly(A) binding protein cytoplasmic 1 like 2BENSG000001843884


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002343  Paraneoplastic encephalomyelitis antigen
 IPR034404  MSSP-1, RNA recognition motif 1
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication NAS
 biological_processGO:0006396 RNA processing TAS
 cellular_componentGO:0005634 nucleus NAS
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003690 double-stranded DNA binding NAS
 molecular_functionGO:0003697 single-stranded DNA binding NAS
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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