ENSGALG00000011132


Gallus gallus

Features
Gene ID: ENSGALG00000011132
  
Biological name :RBMS1
  
Synonyms : RBMS1 / RNA binding motif single stranded interacting protein 1
  
Possible biological names infered from orthology : P29558 / Q91W59
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 21739816
Gene end: 21877466
  
Corresponding Affymetrix probe sets: Gga.4540.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018124
NCBI entrez gene - 395880     See in Manteia.
RefSeq - XM_015289629
RefSeq - NM_205024
RefSeq - XM_015289627
RefSeq - XM_015289628
RefSeq - XM_015289626
RefSeq Peptide - NP_990355
swissprot - O73664
Ensembl - ENSGALG00000011132
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBMS1 (1 of many)ENSDARG00000103823Danio rerio
 rbms1aENSDARG00000074023Danio rerio
 RBMS1ENSG00000153250Homo sapiens
 Rbms1ENSMUSG00000026970Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBMS2 / RNA binding motif single stranded interacting protein 2 / Q15434* / Q8VC70*ENSGALG0000003875766
RBMS3 / RNA binding motif single stranded interacting protein 3 / Q6XE24* / Q8BWL5* / RNA binding motif, single stranded interacting protein*ENSGALG0000001143958
Q13310* / P0CB38* / PABPC4* / PABPC4L* / poly(A) binding protein cytoplasmic 4* / poly(A) binding protein cytoplasmic 4 like*ENSGALG0000000380027
PABPC1 / polyadenylate-binding protein 1 / PABPC3* / Q9H361* / P11940* / P29341* / poly(A) binding protein cytoplasmic 3* / poly(A) binding protein cytoplasmic 1*ENSGALG0000003028027
ELAVL4 / ELAV-like protein 4 / P26378* / Q61701* / ELAV like RNA binding protein 4* / Mus musculus ELAV like RNA binding protein 4 (Elavl4), transcript variant 5, mRNA.*ENSGALG0000001053325
ELAVL2 / ELAV like RNA binding protein 2 / Q12926* / Q60899* / Mus musculus ELAV like RNA binding protein 1 (Elavl2), transcript variant 5, mRNA.*ENSGALG0000001579924
ENSGALG0000003825924
PABPC1L / poly(A) binding protein cytoplasmic 1 like / Q4VXU2*ENSGALG0000000412323
ELAVL1 / ELAV-like protein 1 / P70372* / Q15717* / ELAV like RNA binding protein 1*ENSGALG0000000072623
PUF60 / poly(U)-binding-splicing factor PUF60 / Q3UEB3* / Q9UHX1* / poly(U) binding splicing factor 60*ENSGALG0000003990121


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002343  Paraneoplastic encephalomyelitis antigen
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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