Manteia

ENSDARG00000062376

Danio rerio

Features

Gene ID:	ENSDARG00000062376

Biological name :	nlgn3b

Synonyms :	neuroligin 3b / nlgn3b

Possible biological names infered from orthology :	neuroligin 3 / NLGN3 / Q8BYM5 / Q9NZ94

Species:	Danio rerio

Chr. number:	5
Strand:	-1
Band:
Gene start:	23283890
Gene end:	23317477

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000084604 NCBI entrez gene - 567415 See in Manteia. swissprot - A2BHL9 ZFIN ID - ZDB-GENE-060526-197 Ensembl - ENSDARG00000062376

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
NLGN3	ENSGALG00000005553	Gallus gallus
NLGN3	ENSG00000196338	Homo sapiens
Nlgn3	ENSMUSG00000031302	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
nlgn3a / neuroligin 3a / NLGN3* / Q8BYM5* / Q9NZ94* / neuroligin 3*	ENSDARG00000104786	73
nlgn4a / neuroligin 4a / NLGN4X* / Q8N0W4* / Q8NFZ3* / NLGN4Y* / neuroligin 4, Y-linked* / neuroligin 4, X-linked*	ENSDARG00000079455	63
nlgn4b / neuroligin 4b / NLGN4X* / Q8N0W4* / Q8NFZ3* / NLGN4Y* / neuroligin 4, Y-linked* / neuroligin 4, X-linked*	ENSDARG00000077761	61
nlgn1 / neuroligin 1 / Q8N2Q7* / Q99K10*	ENSDARG00000077710	60
nlgn2b / neuroligin 2b / NLGN2* / Q8NFZ4* / neuroligin 2*	ENSDARG00000079251	58
nlgn2a / neuroligin 2a / NLGN2* / Q69ZK9* / Q8NFZ4* / neuroligin 2*	ENSDARG00000077329	58
ache / Q9DDE3 / acetylcholinesterase / P21836* / P22303* / acetylcholinesterase (Cartwright blood group)*	ENSDARG00000031796	23
cel.2 / carboxyl ester lipase, tandem duplicate 2 / CEL* / Q64285* / carboxyl ester lipase* / Bile salt-activated lipase *	ENSDARG00000029822	20
cel.1 / carboxyl ester lipase, tandem duplicate 1 / CEL* / Q64285* / carboxyl ester lipase* / Bile salt-activated lipase *	ENSDARG00000017490	20
ces3 / carboxylesterase 3 / CES1* / CES2* / Ces2h* / Ces2g* / Ces2f* / Ces2e* / Ces2c* / Ces2b* / Ces2a* / Ces1h* / Ces1g* / Ces1f* / Ces1a* / Ces1b* / Ces1c* / Ces1e* / Ces1d* / CES5A* / C...	ENSDARG00000041595	20
ces2 / carboxylesterase 2 (intestine, liver) / CES1* / CES3* / Ces2h* / Ces2g* / Ces2f* / Ces2e* / Ces2c* / Ces2b* / Ces2a* / Ces1h* / Ces1g* / Ces1f* / Ces1e* / Ces1a* / Ces1b* / Ces1d* / ...	ENSDARG00000041569	19
si:ch211-93f2.1 / CES1* / CES2* / CES3* / Ces2h* / Ces2g* / Ces2f* / Ces2e* / Ces2c* / Ces2b* / Ces2a* / Ces1h* / Ces1g* / Ces1f* / Ces1a* / Ces1b* / Ces1c* / Ces1e* / Ces1d* / CES5A* / CES...	ENSDARG00000101726	16
si:ch211-93f2.1 / CES1* / CES3* / CES2* / CES4A* / CES5A* / Q6NT32* / P23141* / Q5XG92* / Q6UWW8* / O00748* / carboxylesterase 1* / carboxylesterase 2* / carboxylesterase 3* / carboxylester...	ENSDARG00000104818	13

Protein motifs (from Interpro)

Interpro ID	Name
IPR000460	Neuroligin
IPR002018	Carboxylesterase, type B
IPR029058	Alpha/Beta hydrolase fold

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007158	neuron cell-cell adhesion	IBA
biological_process	GO:0048488	synaptic vesicle endocytosis	IBA
biological_process	GO:0050804	modulation of chemical synaptic transmission	IBA
biological_process	GO:0097104	postsynaptic membrane assembly	IBA
biological_process	GO:0097105	presynaptic membrane assembly	IBA
cellular_component	GO:0005887	integral component of plasma membrane	IBA
cellular_component	GO:0009986	cell surface	IBA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA
cellular_component	GO:0045202	synapse	IBA
molecular_function	GO:0042043	neurexin family protein binding	IBA
molecular_function	GO:0052689	carboxylic ester hydrolase activity	IBA

Pathways (from Reactome)

Pathway description

Neurexins and neuroligins

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID	Name	Interaction type
ENSDARG00000062376	nlgn3b / neuroligin 3b / NLGN3* / Q8BYM5* / Q9NZ94* / neuroligin 3*	/ complex
ENSDARG00000104786	nlgn3a / neuroligin 3a / NLGN3* / Q8BYM5* / Q9NZ94* / neuroligin 3*	/ complex

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr