ENSDARG00000077710


Danio rerio

Features
Gene ID: ENSDARG00000077710
  
Biological name :nlgn1
  
Synonyms : neuroligin 1 / nlgn1
  
Possible biological names infered from orthology : Q8N2Q7 / Q99K10
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 9564154
Gene end: 9985415
  
Corresponding Affymetrix probe sets: Dr.18973.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000098640
Ensembl peptide - ENSDARP00000155186
Ensembl peptide - ENSDARP00000139283
Ensembl peptide - ENSDARP00000105451
NCBI entrez gene - 100002610     See in Manteia.
RefSeq - NM_001142265
RefSeq Peptide - NP_001135737
swissprot - B6EUL6
swissprot - A0A0G2L3F9
swissprot - F1QCZ5
swissprot - E7F5U4
swissprot - D2X2F9
ZFIN ID - ZDB-GENE-090918-1
Ensembl - ENSDARG00000077710
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NLGN1ENSGALG00000040938Gallus gallus
 NLGN1ENSG00000169760Homo sapiens
 Nlgn1ENSMUSG00000063887Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nlgn4a / neuroligin 4a / NLGN4X* / Q8N0W4* / Q8NFZ3* / NLGN4Y* / neuroligin 4, Y-linked* / neuroligin 4, X-linked*ENSDARG0000007945567
nlgn3a / neuroligin 3a / NLGN3* / Q8BYM5* / Q9NZ94* / neuroligin 3*ENSDARG0000010478666
nlgn2a / neuroligin 2a / NLGN2* / Q69ZK9* / Q8NFZ4* / neuroligin 2*ENSDARG0000007732964
nlgn2b / neuroligin 2b / NLGN2* / Q8NFZ4* / neuroligin 2*ENSDARG0000007925163
nlgn4b / neuroligin 4b / NLGN4X* / Q8N0W4* / Q8NFZ3* / NLGN4Y* / neuroligin 4, Y-linked* / neuroligin 4, X-linked*ENSDARG0000007776162
nlgn3b / neuroligin 3b / NLGN3* / Q8BYM5* / Q9NZ94* / neuroligin 3*ENSDARG0000006237658
ache / Q9DDE3 / acetylcholinesterase / P21836* / P22303* / acetylcholinesterase (Cartwright blood group)*ENSDARG0000003179623
cel.2 / carboxyl ester lipase, tandem duplicate 2 / CEL* / Q64285* / carboxyl ester lipase* / Bile salt-activated lipase *ENSDARG0000002982220
cel.1 / carboxyl ester lipase, tandem duplicate 1 / CEL* / Q64285* / carboxyl ester lipase* / Bile salt-activated lipase *ENSDARG0000001749020
ces3 / carboxylesterase 3 / CES1* / CES2* / Ces2h* / Ces2g* / Ces2f* / Ces2e* / Ces2c* / Ces2b* / Ces2a* / Ces1h* / Ces1g* / Ces1f* / Ces1a* / Ces1b* / Ces1c* / Ces1e* / Ces1d* / CES5A* / C...ENSDARG0000004159519
ces2 / carboxylesterase 2 (intestine, liver) / CES1* / CES3* / Ces2h* / Ces2g* / Ces2f* / Ces2e* / Ces2c* / Ces2b* / Ces2a* / Ces1h* / Ces1g* / Ces1f* / Ces1e* / Ces1a* / Ces1b* / Ces1d* / ...ENSDARG0000004156919
si:ch211-93f2.1 / CES1* / CES2* / CES3* / Ces2h* / Ces2g* / Ces2f* / Ces2e* / Ces2c* / Ces2b* / Ces2a* / Ces1h* / Ces1g* / Ces1f* / Ces1a* / Ces1b* / Ces1c* / Ces1e* / Ces1d* / CES5A* / CES...ENSDARG0000010172615
si:ch211-93f2.1 / CES1* / CES3* / CES2* / CES4A* / CES5A* / Q6NT32* / P23141* / Q5XG92* / Q6UWW8* / O00748* / carboxylesterase 1* / carboxylesterase 2* / carboxylesterase 3* / carboxylester...ENSDARG0000010481812


Protein motifs (from Interpro)
Interpro ID Name
 IPR000460  Neuroligin
 IPR002018  Carboxylesterase, type B
 IPR019819  Carboxylesterase type B, conserved site
 IPR029058  Alpha/Beta hydrolase fold
 IPR030022  Neuroligin-1
 IPR030023  Neuroligin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002040 sprouting angiogenesis IGI
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007158 neuron cell-cell adhesion IBA
 biological_processGO:0048488 synaptic vesicle endocytosis IBA
 biological_processGO:0050804 modulation of chemical synaptic transmission IBA
 biological_processGO:0050808 synapse organization IEA
 biological_processGO:0097104 postsynaptic membrane assembly IBA
 biological_processGO:0097105 presynaptic membrane assembly IBA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0009986 cell surface IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045202 synapse IBA
 cellular_componentGO:0060076 excitatory synapse IEA
 molecular_functionGO:0042043 neurexin family protein binding IBA
 molecular_functionGO:0052689 carboxylic ester hydrolase activity IBA


Pathways (from Reactome)
Pathway description
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001286 caudal vein plexus caudal vein plexus malformed , abnormal
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 ZFA:0005035 subintestinal vein subintestinal vein malformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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