ENSDARG00000062688


Danio rerio

Features
Gene ID: ENSDARG00000062688
  
Biological name :gpnmb
  
Synonyms : glycoprotein (transmembrane) nmb / gpnmb
  
Possible biological names infered from orthology : glycoprotein nmb / Q14956 / Q99P91 / Transmembrane glycoprotein NMB
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 20247435
Gene end: 20270207
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000085316
Ensembl peptide - ENSDARP00000126111
Ensembl peptide - ENSDARP00000119730
NCBI entrez gene - 563348     See in Manteia.
swissprot - E9QDN9
swissprot - E7F7J7
swissprot - I3IT55
ZFIN ID - ZDB-GENE-060503-106
Ensembl - ENSDARG00000062688
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GPNMBENSGALG00000010949Gallus gallus
 GPNMBENSG00000136235Homo sapiens
 GpnmbENSMUSG00000029816Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pmela / premelanosome protein a / PMEL* / P40967* / premelanosome protein*ENSDARG0000009129823
pmelb / premelanosome protein b / PMEL* / P40967* / premelanosome protein*ENSDARG0000003376021


Protein motifs (from Interpro)
Interpro ID Name
 IPR000601  PKD domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005178 integrin binding IBA


Pathways (from Reactome)
Pathway description
PTK6 promotes HIF1A stabilization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000059956 ptk6b / PTK6 protein tyrosine kinase 6b / PTK6* / Q64434* / Q13882* / protein tyrosine kinase 6* / PTK6 protein tyrosine kinase 6*  / complex
 ENSDARG00000006181 hif1aa / hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) a / HIF1A* / Q61221* / Q16665* / Hypoxia-inducible factor 1-alpha * / hypoxia inducible fact...  / reaction
 ENSDARG00000034293 hif1ab / hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) b / HIF1A* / Q61221* / Q16665* / Hypoxia-inducible factor 1-alpha * / hypoxia inducible fact...  / reaction
 ENSDARG00000075121 hbegfa / heparin-binding EGF-like growth factor a / HBEGF* / Q06186* / Q99075* / heparin binding EGF like growth factor* / Proheparin-binding EGF-like growth factor Heparin-binding EGF-like...  / complex
 ENSDARG00000017947 ptk6a / PTK6 protein tyrosine kinase 6a / PTK6* / Q64434* / Q13882* / protein tyrosine kinase 6* / PTK6 protein tyrosine kinase 6*  / complex






 

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