ENSDARG00000089444


Danio rerio

Features
Gene ID: ENSDARG00000089444
  
Biological name :omgb
  
Synonyms : oligodendrocyte myelin glycoprotein b / omgb
  
Possible biological names infered from orthology : oligodendrocyte myelin glycoprotein / OMG / P23515
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 30917282
Gene end: 30921559
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106283
NCBI entrez gene - 101882436     See in Manteia.
swissprot - E7FDN5
ZFIN ID - ZDB-GENE-110628-1
Ensembl - ENSDARG00000089444
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OMGENSGALG00000005594Gallus gallus
 OMGENSG00000126861Homo sapiens
 OmgENSMUSG00000049612Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
omga / oligodendrocyte myelin glycoprotein a / OMG* / P23515* / oligodendrocyte myelin glycoprotein*ENSDARG0000008657337
flrt1b / fibronectin leucine rich transmembrane protein 1b / FLRT1* / Q6RKD8* / Q9NZU1* / fibronectin leucine rich transmembrane protein 1* / Leucine-rich repeat transmembrane protein FLRT1 *ENSDARG0000007559722
flrt2 / fibronectin leucine rich transmembrane protein 2 / O43155* / Q8BLU0* / Leucine-rich repeat transmembrane protein FLRT2 *ENSDARG0000009729919
flrt2 / fibronectin leucine rich transmembrane protein 2 / O43155* / Q8BLU0* / Leucine-rich repeat transmembrane protein FLRT2 *ENSDARG0000007935518
flrt3 / fibronectin leucine rich transmembrane 3 / Q8BGT1* / Q9NZU0* / fibronectin leucine rich transmembrane protein 3* / Leucine-rich repeat transmembrane protein FLRT3 *ENSDARG0000007689518
si:ch211-191d15.2 / Nepn* / Q9CQ76* / Nephrocan *ENSDARG0000009283415
si:dkey-90m5.4 / LRG1* / P02750* / leucine rich alpha-2-glycoprotein 1*ENSDARG0000002938813


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IBA
 cellular_componentGO:0005615 extracellular space IBA


Pathways (from Reactome)
Pathway description
Axonal growth inhibition (RHOA activation)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000094673 rhoab / Q6DHM9 / ras homolog gene family, member Ab / RHOA* / Q9QUI0* / P61586* / ras homolog family member A*  / reaction / complex
 ENSDARG00000035899 Q66HV9 / lingo1b / leucine rich repeat and Ig domain containing 1b / Q9D1T0* / LINGO1* / Q96FE5* / leucine rich repeat and Ig domain containing 1* / Leucine-rich repeat and immunoglobulin-l...  / reaction / complex
 ENSDARG00000034165 lingo1a / leucine rich repeat and Ig domain containing 1a / Q9D1T0* / LINGO1* / Q96FE5* / leucine rich repeat and Ig domain containing 1* / Leucine-rich repeat and immunoglobulin-like domai...  / complex / reaction
 ENSDARG00000088708 ngfra / nerve growth factor receptor a (TNFR superfamily, member 16) / NGFR* / P08138* / nerve growth factor receptor*  / complex / reaction
 ENSDARG00000089223 ngfrb / nerve growth factor receptor b / NGFR* / P08138* / nerve growth factor receptor*  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr