ENSDARG00000104231


Danio rerio

Features
Gene ID: ENSDARG00000104231
  
Biological name :opn9
  
Synonyms : opn9 / opsin 9
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 17163193
Gene end: 17188294
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000144968
Ensembl peptide - ENSDARP00000133469
NCBI entrez gene - 101882119     See in Manteia.
RefSeq - NM_001317751
RefSeq - XM_005157939
RefSeq Peptide - NP_001304680
swissprot - A0A0R4IEG0
ZFIN ID - ZDB-GENE-141216-390
Ensembl - ENSDARG00000104231
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
opn5 / opsin 5 / Q6U736* / Q6VZZ7*ENSDARG0000007011026
opn7b / opsin 7, group member bENSDARG0000011658422
opn8c / opsin 8, group member cENSDARG0000004347921
opn7a / opsin 7, group member aENSDARG0000002420821
opn7c / opsin 7, group member cENSDARG0000003086721
opn7d / opsin 7, group member dENSDARG0000006812421
opn4.1 / Q1JPS6 / opsin 4.1 / OPN4* / Q9UHM6* / Q9QXZ9* / opsin 4* / Melanopsin *ENSDARG0000000755319
opn4a / opsin 4a (melanopsin) / OPN4* / Q9UHM6* / Q9QXZ9* / opsin 4* / Melanopsin *ENSDARG0000002209819
opn8b / opsin 8, group member bENSDARG0000007904519
opn8a / opsin 8, group member aENSDARG0000008618619
opn6a / opsin 6, group member aENSDARG0000010243019
opn4b / opsin 4b / OPN4* / Q9UHM6* / opsin 4*ENSDARG0000005392919
opn4xa / opsin 4xaENSDARG0000007912918
opn4xb / opsin 4xbENSDARG0000010325918
opn6b / opsin 6, group member bENSDARG0000009805118
tmtopsb / teleost multiple tissue opsin bENSDARG0000003224617
rrh / retinal pigment epithelium-derived rhodopsin homolog / O14718* / O35214*ENSDARG0000003953417
tmtops2b / teleost multiple tissue opsin 2bENSDARG0000002782216
Q8AYN0 / opn1lw2 / opsin 1 (cone pigments), long-wave-sensitive, 2 / OPN1MW* / P04000* / P0DN77* / O35599* / P0DN78* / P04001* / OPN1LW* / OPN1MW3* / OPN1MW2* / opsin 1, long wave sensitive...ENSDARG0000004486116
parapinopsinb / parapinopsin bENSDARG0000004467216


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR017452  GPCR, rhodopsin-like, 7TM


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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