ENSG00000038295


Homo sapiens

Features
Gene ID: ENSG00000038295
  
Biological name :TLL1
  
Synonyms : O43897 / TLL1 / tolloid like 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q32.3
Gene start: 165873258
Gene end: 166103895
  
Corresponding Affymetrix probe sets: 1555071_at (Human Genome U133 Plus 2.0 Array)   206415_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000423748
Ensembl peptide - ENSP00000061240
Ensembl peptide - ENSP00000426082
Ensembl peptide - ENSP00000421732
Ensembl peptide - ENSP00000422937
Ensembl peptide - ENSP00000422692
NCBI entrez gene - 7092     See in Manteia.
OMIM - 606742
RefSeq - XM_017008570
RefSeq - NM_001204760
RefSeq - NM_012464
RefSeq - XM_011532214
RefSeq Peptide - NP_036596
RefSeq Peptide - NP_001191689
swissprot - D6RAK5
swissprot - O43897
swissprot - D6RCE0
swissprot - D6RBI6
swissprot - E9PD25
Ensembl - ENSG00000038295
  
Related genetic diseases (OMIM): 613087 - Atrial septal defect 6, 613087
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tll1ENSDARG00000037429Danio rerio
 TLL1ENSGALG00000009567Gallus gallus
 Tll1ENSMUSG00000053626Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TLL2 / Q9Y6L7 / tolloid like 2ENSG0000009558772
BMP1 / P13497 / bone morphogenetic protein 1ENSG0000016848771
CUBN / O60494 / cubilinENSG0000010761129
MFRP / Q9BY79 / membrane frizzled-related proteinENSG0000023571813
CDCP2 / Q5VXM1 / CUB domain containing protein 2ENSG0000015721112
PCOLCE / Q15113 / procollagen C-endopeptidase enhancerENSG0000010633311
NETO2 / Q8NC67 / neuropilin and tolloid like 2ENSG0000017120811
NETO1 / Q8TDF5 / neuropilin and tolloid like 1ENSG0000016634210
Q9UKZ9 / PCOLCE2 / procollagen C-endopeptidase enhancer 2ENSG0000016371010


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR000859  CUB domain
 IPR001506  Peptidase M12A
 IPR001881  EGF-like calcium-binding domain
 IPR006026  Peptidase, metallopeptidase
 IPR013032  EGF-like, conserved site
 IPR015446  Bone morphogenetic protein 1/tolloid-like protein
 IPR018097  EGF-like calcium-binding, conserved site
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR034036  Tolloid/BMP1 peptidase domain
 IPR035914  Spermadhesin, CUB domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development TAS
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0022617 extracellular matrix disassembly TAS
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0004252 serine-type endopeptidase activity TAS
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Degradation of the extracellular matrix
Collagen biosynthesis and modifying enzymes
Anchoring fibril formation
Crosslinking of collagen fibrils


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
Show

 HP:0001662 Bradycardia 
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 HP:0005110 Atrial fibrillation 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000113083 LOX / P28300 / lysyl oxidase  / reaction
 ENSG00000142798 HSPG2 / P98160 / heparan sulfate proteoglycan 2  / reaction
 ENSG00000129038 LOXL1 / Q08397 / lysyl oxidase like 1  / reaction






 

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contact: otassy@igbmc.fr