ENSG00000100285


Homo sapiens

Features
Gene ID: ENSG00000100285
  
Biological name :NEFH
  
Synonyms : NEFH / neurofilament heavy / P12036
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: 1
Band: q12.2
Gene start: 29480230
Gene end: 29491390
  
Corresponding Affymetrix probe sets: 204412_s_at (Human Genome U133 Plus 2.0 Array)   33767_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000311997
NCBI entrez gene - 4744     See in Manteia.
OMIM - 162230
RefSeq - NM_021076
RefSeq - XM_011530200
RefSeq Peptide - NP_066554
swissprot - P12036
Ensembl - ENSG00000100285
  
Related genetic diseases (OMIM): 105400 - ?{Amyotrophic lateral sclerosis, susceptibility to}, 105400
  616924 - Charcot-Marie-Tooth disease, axonal, type 2CC, 616924
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NEFHENSGALG00000008085Gallus gallus
 NefhENSMUSG00000020396Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NEFM / P07197 / neurofilament mediumENSG0000010472233
INA / Q16352 / internexin neuronal intermediate filament protein alphaENSG0000014879821
NEFL / P07196 / neurofilament lightENSG0000027758619
VIM / P08670 / vimentinENSG0000002602518
DES / desmin / P17661ENSG0000017508417
GFAP / P14136 / glial fibrillary acidic proteinENSG0000013109516
PRPH / P41219 / peripherinENSG0000013540616
LMNB2 / Q03252 / lamin B2ENSG0000017661914
LMNA / P02545 / lamin A/CENSG0000016078913
LMNB1 / P20700 / lamin B1ENSG0000011336812


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR010790  Repeat of unknown function DUF1388
 IPR018039  Intermediate filament protein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization IEA
 biological_processGO:0007409 axonogenesis TAS
 biological_processGO:0030031 cell projection assembly TAS
 biological_processGO:0033693 neurofilament bundle assembly IMP
 biological_processGO:0045104 intermediate filament cytoskeleton organization IEA
 biological_processGO:0045110 intermediate filament bundle assembly IEA
 biological_processGO:0048936 peripheral nervous system neuron axonogenesis IEA
 biological_processGO:0060052 neurofilament cytoskeleton organization IEA
 biological_processGO:0061564 axon development IMP
 biological_processGO:1902513 regulation of organelle transport along microtubule IMP
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005856 cytoskeleton IDA
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0005883 neurofilament NAS
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0043209 myelin sheath IEA
 cellular_componentGO:0097418 neurofibrillary tangle IDA
 molecular_functionGO:0005198 structural molecule activity IMP
 molecular_functionGO:0005200 structural constituent of cytoskeleton ISS
 molecular_functionGO:0008017 microtubule binding TAS
 molecular_functionGO:0019894 kinesin binding TAS
 molecular_functionGO:0019901 protein kinase binding IPI
 molecular_functionGO:0030674 protein binding, bridging ISS
 molecular_functionGO:0070840 dynein complex binding TAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000217 Xerostomia "Dryness of the mouth due to salivary gland dysfunction." [HPO:curators]
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 HP:0000712 Emotional lability 
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 HP:0000713 Agitation 
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000739 Anxiety 
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001761 Pes cavus 
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 HP:0002017 Nausea and vomiting 
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 HP:0002021 Pyloric stenosis 
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 HP:0002094 Dyspnea 
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 HP:0002180 Neurodegeneration 
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 HP:0002359 Frequent falls 
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 HP:0002495 Impaired vibratory sense "A decrease in the ability to perceive vibration. Clinically, this is usually tested with a tuning fork which vibrates at 128 Hz and is applied to bony prominences such as the malleoli at the ankles or the metacarpal-phalangeal joints. There is a slow decay of vibration from the tuning fork. The degree of vibratory sense loss can be crudely estimated by counting the number of seconds that the examiner can perceive the vibration longer than the patient." [HPO:curators]
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 HP:0002515 Waddling gait 
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 HP:0002878 Early respiratory failure 
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 HP:0002936 Distal sensory impairment 
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 HP:0003198 Myopathy 
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 HP:0003200 Ragged-red muscle fibers "An abnormal appearance of muscle fibers observed on muscle biopsy. Ragged red fibers can be visualized with Gomori trichrome (GT) staining as irregular and intensely red subsarcolemmal zones, whereas the normal myofibrils are green. The margins of affect fibers appear red and ragged." [HPO:curators]
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
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 HP:0003390 Sensory axonal neuropathy "An axonal neuropathy of peripheral sensory nerves." [HPO:curators]
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 HP:0003394 Muscle cramps 
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 HP:0003445 EMG shows neuropathic changes 
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 HP:0003470 Paralysis "Paralysis of voluntary muscles means loss of contraction due to interruption of one or more motor pathways from the brain to the muscle fibers. Although the word paralysis is often used interchangeably to mean either complete or partial loss of muscle strength, it is preferable to use paralysis or plegia for complete or severe loss of muscle strength, and paresis for partial or slight loss. Motor paralysis results from deficits of the upper motor neurons (corticospinal, corticobulbar, or subcorticospinal). Motor paralysis is often accompanied by an impairment in the facility of movement." [HPO:curators]
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 HP:0003484 Upper limb involvement may occur later 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003555 Muscle fiber splitting "Fiber splitting or branching is a common finding in human and rat skeletal muscle pathology. Fiber splitting refers to longitudinal halving of the complete fiber, while branching originates from a regenerating end of a necrotic fiber as invaginations of the sarcolemma. In fiber branching, one end of the fiber remains intact as a single entity, while the other end has several branches." [pmid:6123177]
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 HP:0003557 Increased variability in muscle fiber size "An abnormally high degree of muscle fiber size variation. This phenotypic feature can be observed upon muscle biopsy." [HPO:curators]
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 HP:0003676 Progressive disorder 
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0003805 Rimmed vacuoles 
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 HP:0003828 Variable expressivity 
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 HP:0005945 Laryngeal obstruction 
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 HP:0007210 Lower limb hypotrophy 
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 HP:0007340 Lower limb muscle weakness "Weakness of the muscles of the legs." [HPO:curators]
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 HP:0007354 Amyotrophic lateral sclerosis 
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 HP:0009129 Amyotrophy involving the upper limbs "Muscular atrophy involving the muscles of the upper limbs." [HPO:curators]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0012531 Pain "An unpleasant sensory and emotional experience associated with actual or potential tissue damage, or described in terms of such damage." [ORCID:0000-0001-5208-3432]
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 HP:0030195 Fatigable weakness of swallowing muscles "A type of weakness of the muscles involved in swallowing that occurs after a muscle group is used and lessens if the muscle group has some rest. That is, there is diminution of strength with repetitive muscle actions." [pmid:17986328, UK:rheller]
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 HP:0030196 Fatigable weakness of respiratory muscles "A type of weakness of the muscles involved in breathing (respiration) that occurs after a muscle group is used and lessens if the muscle group has some rest. That is, there is diminution of strength with repetitive muscle actions." [UNCL:mbertoli]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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