ENSG00000160789


Homo sapiens

Features
Gene ID: ENSG00000160789
  
Biological name :LMNA
  
Synonyms : lamin A/C / LMNA / P02545
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q22
Gene start: 156082573
Gene end: 156140089
  
Corresponding Affymetrix probe sets: 1554600_s_at (Human Genome U133 Plus 2.0 Array)   203411_s_at (Human Genome U133 Plus 2.0 Array)   212086_x_at (Human Genome U133 Plus 2.0 Array)   212089_at (Human Genome U133 Plus 2.0 Array)   214213_x_at (Human Genome U133 Plus 2.0 Array)   244225_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000424518
Ensembl peptide - ENSP00000421821
Ensembl peptide - ENSP00000424977
Ensembl peptide - ENSP00000426535
Ensembl peptide - ENSP00000292304
Ensembl peptide - ENSP00000355292
Ensembl peptide - ENSP00000357280
Ensembl peptide - ENSP00000357282
Ensembl peptide - ENSP00000357283
Ensembl peptide - ENSP00000357284
Ensembl peptide - ENSP00000395597
NCBI entrez gene - 4000     See in Manteia.
OMIM - 150330
RefSeq - XM_011509534
RefSeq - NM_001257374
RefSeq - NM_001282624
RefSeq - NM_001282625
RefSeq - NM_001282626
RefSeq - NM_005572
RefSeq - NM_170707
RefSeq - NM_170708
RefSeq - XM_011509533
RefSeq Peptide - NP_005563
RefSeq Peptide - NP_733821
RefSeq Peptide - NP_733822
RefSeq Peptide - NP_001269554
RefSeq Peptide - NP_001269555
RefSeq Peptide - NP_001244303
RefSeq Peptide - NP_001269553
swissprot - Q5TCI8
swissprot - D6RB20
swissprot - H0YAB0
swissprot - P02545
swissprot - Q3BDU5
swissprot - A0A0C4DGC5
Ensembl - ENSG00000160789
  
Related genetic diseases (OMIM): 115200 - Cardiomyopathy, dilated, 1A, 115200
  605588 - Charcot-Marie-Tooth disease, type 2B1, 605588
  181350 - Emery-Dreifuss muscular dystrophy 2, AD, 181350
  616516 - Emery-Dreifuss muscular dystrophy 3, AR, 616516
  610140 - Heart-hand syndrome, Slovenian type, 610140
  176670 - Hutchinson-Gilford progeria, 176670
  151660 - Lipodystrophy, familial partial, type 2, 151660
  212112 - Malouf syndrome, 212112
  248370 - Mandibuloacral dysplasia, 248370
  613205 - Muscular dystrophy, congenital, 613205
  159001 - Muscular dystrophy, limb-girdle, type 1B, 159001
  275210 - Restrictive dermopathy, lethal, 275210
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lmnaENSDARG00000013415Danio rerio
 ENSGALG00000006083Gallus gallus
 LmnaENSMUSG00000028063Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LMNB1 / P20700 / lamin B1ENSG0000011336849
LMNB2 / Q03252 / lamin B2ENSG0000017661948
NEFM / P07197 / neurofilament mediumENSG0000010472221
PRPH / P41219 / peripherinENSG0000013540620
DES / desmin / P17661ENSG0000017508419
NEFH / P12036 / neurofilament heavyENSG0000010028519
NEFL / P07196 / neurofilament lightENSG0000027758619
GFAP / P14136 / glial fibrillary acidic proteinENSG0000013109517
VIM / P08670 / vimentinENSG0000002602517
INA / Q16352 / internexin neuronal intermediate filament protein alphaENSG0000014879817


Protein motifs (from Interpro)
Interpro ID Name
 IPR001322  Lamin tail domain
 IPR001664  Intermediate filament protein
 IPR018039  Intermediate filament protein, conserved site
 IPR036415  Lamin tail domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006997 nucleus organization IEA
 biological_processGO:0006998 nuclear envelope organization IEA
 biological_processGO:0007077 mitotic nuclear envelope disassembly TAS
 biological_processGO:0007084 mitotic nuclear envelope reassembly TAS
 biological_processGO:0008285 negative regulation of cell proliferation IMP
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0030334 regulation of cell migration ISS
 biological_processGO:0030951 establishment or maintenance of microtubule cytoskeleton polarity ISS
 biological_processGO:0034504 protein localization to nucleus ISS
 biological_processGO:0035105 obsolete sterol regulatory element binding protein import into nucleus IEA
 biological_processGO:0036498 IRE1-mediated unfolded protein response TAS
 biological_processGO:0055015 ventricular cardiac muscle cell development IEA
 biological_processGO:0071456 cellular response to hypoxia IEP
 biological_processGO:0072201 negative regulation of mesenchymal cell proliferation IEA
 biological_processGO:0090201 negative regulation of release of cytochrome c from mitochondria IEA
 biological_processGO:0090343 positive regulation of cell aging IDA
 biological_processGO:1900180 regulation of protein localization to nucleus IEA
 biological_processGO:1903243 negative regulation of cardiac muscle hypertrophy in response to stress ISS
 biological_processGO:2001237 negative regulation of extrinsic apoptotic signaling pathway IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope TAS
 cellular_componentGO:0005638 lamin filament IEA
 cellular_componentGO:0005652 nuclear lamina IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0031965 nuclear membrane HDA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
XBP1(S) activates chaperone genes
Signaling by BRAF and RAF fusions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000035 Abnormality of the testis 
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 HP:0000044 Hypogonadotrophic hypogonadism "Hypogonadotropic hypogonadism is characterized by reduced function of the gonads (testes in males or ovaries in females) and results from the absence of the gonadal stimulating pituitary hormones: follicle stimulating hormone (FSH) and luteinizing hormone (LH)." [HPO:curators]
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 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
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 HP:0000073 Ureteral duplication "A developmental anomaly characterized by the presence of two, instead of one, ureter connecting a kidney to the bladder." [HPO:curators]
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000144 Decreased fertility 
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 HP:0000147 polycystic ovaries 
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 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
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 HP:0000164 Abnormality of the teeth "Any abnormality of the primary (deciduous) or permanent teeth." [HPO:curators]
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 HP:0000176 Submucous cleft palate "A cleft palate that is covered by the mucous membrane of the roof of the mouth, which can make the cleft more difficult to observe upon physical examination. Soft-palate submucous clefts are characterized by a midline deficiency or lack of muscle tissue. Hard-palate submucous clefts are characterized by bony defects in the midline of the bony palate. It may be possible to detect a submucous cleft palate upon palpation as a notch in the bony palate." [HPO:curators, pmid:19779505]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000233 Thin vermillion border 
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 HP:0000239 Large fontanelles "In newborns, the two frontal bones, two parietal bones, and one occipital bone are joined by fibrous sutures, which form a small posterior fontanelle, and a larger, diamond-shaped anterior fontanelle. These regions allow for the skull to pass the birth canal and for later growth. The fontanelles gradually ossify, whereby the posterior fontanelle usually closes by eight weeks and the anterior fontanelle by the 9th to 16th month of age. Large fontanelles are diagnosed if the fontanelles are larger than age-dependent norms." [HPO:curators]
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 HP:0000270 Delayed closure of fontanelles "Infants normally have two fontanels at birth, the diamond-shaped anterior fontanelle at the junction of the coronal and sagittal sutures, and the posterior fontanelle at the intersection of the occipital and parietal bones. The posterior fontanelle usually closes by the 8th week of life, and the anterior fontanel closes by the 18th month of life on average. This term applies if there is delay of closure of the fontanelles beyond the normal age." [HPO:curators]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000275 Narrow face 
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 HP:0000278 Retrognathia 
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 HP:0000287 Normal or increased facial adipose tissue 
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 HP:0000293 Full cheeks 
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 HP:0000311 Round face "An unusually round appearance of the face." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000320 Bird-like facies 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000377 Abnormal form of ears "Abnormal form of the out part of the ear (also referred to as the auricle or pinna)." [HPO:curators]
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 HP:0000400 Large ears 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000418 Pinched nose 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000444 Beaked nose 
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 HP:0000453 Choanal atresia "Absence or abnormal closure of the choana (the posterior nasal aperture)." [HPO:curators]
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 HP:0000465 Webbed neck 
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 HP:0000467 Neck muscle weakness 
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 HP:0000468 Normal or increased adipose tissue around the neck 
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000506 Telecanthus "An abnormally increased distance between the medial canthi (angle between eyelids) of the eyelids." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000519 Congenital cataract "A congenital `cataract` (HP:0000518)." [HPO:probinson]
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 HP:0000520 Proptosis 
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 HP:0000534 Abnormality of the eyebrow "An abnormality of the `eyebrow` (FMA:54237)." [HPO:probinson]
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 HP:0000535 Sparse eyebrows 
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 HP:0000540 Hypermetropia 
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 HP:0000546 Retinal degeneration 
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 HP:0000561 Absent eyelashes "Lack of eyelashes." [HPO:curators]
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 HP:0000581 Blepharophimosis "Reduced width of the palpebral fissures." [HPO:sdoelken]
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 HP:0000621 Entropion "An abnormal turning inward of the upper and/or lower eyelid." [HPO:sdoelken]
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 HP:0000653 Sparse eyelashes "Decreased density/number of eyelashes." [pmid:19125427]
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 HP:0000668 Hypodontia "Hypodontia describes a situation when there are fewer than the normal number of teeth, whereby 6 teeth or fewer teeth are missing (oligodontia refers to the condition of missing more than 6 teeth and the congenital absence of all teeth is called anodontia)." [HPO:curators]
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 HP:0000678 Dental overcrowding 
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 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
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 HP:0000685 Hypoplastic teeth 
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 HP:0000695 Neonatal teeth 
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 HP:0000774 Narrow chest 
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 HP:0000789 Infertility 
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 HP:0000815 Hypergonadotropic hypogonadism "Reduced function of the gonads (testes in males or ovaries in females) associated with excess pituitary gonadotropin secretion and resulting in delayed sexual development and growth delay." [HPO:curators]
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 HP:0000819 Diabetes mellitus 
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0000823 Delayed puberty 
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 HP:0000826 Precocious puberty "The onset of secondary sexual characteristics before a normal age. Although it is difficult to define normal age ranges because of the marked variation with which puberty begins in normal children, precocious puberty can be defined as the onset of puberty before the age of 8 years in girls or 9 years in boys." [HPO:curators]
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 HP:0000831 Insulin-resistant diabetes mellitus 
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 HP:0000833 Glucose intolerance 
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 HP:0000835 Adrenal hypoplasia 
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 HP:0000842 Hyperinsulinemia 
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 HP:0000855 Insulin resistance 
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 HP:0000869 Secondary amenorrhea 
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 HP:0000877 Insulin-resistant diabetes mellitus at puberty 
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 HP:0000883 Thin ribs 
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 HP:0000894 Short clavicles 
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 HP:0000905 Progressive acroosteolysis of the clavicle 
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 HP:0000934 Chondrocalcinosis 
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 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
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 HP:0000953 Hyperpigmentation 
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 HP:0000956 Acanthosis nigricans 
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 HP:0000961 Cyanosis 
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 HP:0000962 Hyperkeratosis "Hyperkeratosis is thickening of the outer layer of the skin, the stratum corneum, which is composed of large, polyhedral, plate-like envelopes filled with keratin which are the dead cells that have migrated up from the stratum granulosum." [HPO:curators]
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 HP:0000963 Thin skin 
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 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
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 HP:0000991 Xanthomatosis "The presence of multiple xanthomas (xanthomata) in the skin. Xanthomas are yellowish, firm, lipid-laden nodules in the skin." [HPO:curators]
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 HP:0001006 Hypotrichosis "Reduced or lacking hair growth." [HPO:curators]
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 HP:0001007 Hirsutism "Abnormally increased hair growth." [HPO:curators]
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 HP:0001015 Prominent superficial veins 
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 HP:0001043 Prominent scalp veins 
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 HP:0001070 Mottled pigmentation 
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 HP:0001097 Keratoconjunctivitis sicca "Dryness of the eye related to deficiency of the tear film components (aqueous, mucin, or lipid), lid surface abnormalities, or epithelial abnormalities. Keratoconjunctivitis sicca often results in a scratchy or sandy sensation (foreign body sensation) in the eyes, and may also be associated with itching, inability to produce tears, photosensitivity, redness, pain, and difficulty in moving the eyelids." [HPO:curators]
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 HP:0001156 Brachydactyly 
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 HP:0001159 Syndactyly "Webbing or fusion of the fingers or toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers or toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0001196 Short umbilical cord 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001270 Motor retardation 
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 HP:0001279 Syncope "Syncope refers to a generalized weakness of muscles with loss of postural tone, inability to stand upright, and loss of consciousness. Once the patient is in a horizontal position, blood flow to the brain is no longer hindered by gravitation and consciousness is regained. Unconsciousness usually lasts for seconds to minutes. Headache and drowsiness (which usually follow seizures) do not follow a syncopal attack. Syncope results from a sudden impairment of brain metabolism usually due to a reduction in cerebral blood flow. This term refers to an abnormally increased disposition to syncope." [HPO:curators]
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 HP:0001284 Areflexia 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001376 Decreased mobility of joints 
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 HP:0001385 Hip dysplasia 
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001397 Hepatic steatosis 
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 HP:0001425 Heterogeneous 
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 HP:0001508 Failure to thrive 
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 HP:0001510 Growth retardation 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001522 Death in infancy 
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 HP:0001558 Decreased fetal movement "An abnormal reduction in quantity or strength of fetal movements." [HPO:curators]
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 HP:0001561 Polyhydramnios 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001597 Abnormality of the nails "Abnormality of the fingernails or toenails." [HPO:curators]
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 HP:0001601 Laryngomalacia 
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 HP:0001608 Abnormality of the voice "Any abnormality of the voice." [HPO:curators]
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 HP:0001611 Nasal speech 
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 HP:0001620 High pitched voice 
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 HP:0001622 Premature birth 
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001634 Mitral valve prolapse 
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0001639 Hypertrophic cardiomyopathy 
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001644 Dilated cardiomyopathy 
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 HP:0001645 Sudden cardiac death 
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 HP:0001650 Aortic stenosis "The presence of a stenosis (narrowing) of the aortic valve." [HPO:curators]
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 HP:0001651 Dextrocardia "A left-right reversal (or "mirror reflection") of the anatomical location of the heart in which the heart is locate on the right side in stead of the left." [HPO:sdoelken]
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 HP:0001653 Mitral regurgitation "An `abnormality of the mitral valve` (HP:0001633) characterized by insufficiency or incompetence of the mitral valve resulting in retrograde leaking of blood through the mitral valve upon ventricular contraction." [HPO:probinson]
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 HP:0001657 Prolonged QT interval on EKG 
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 HP:0001658 Myocardial infarction 
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 HP:0001662 Bradycardia 
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 HP:0001669 Transposition of the great vessels 
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 HP:0001677 Coronary artery disease 
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 HP:0001681 Angina pectoris 
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 HP:0001692 Atrial arrhythmias 
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 HP:0001698 Pericardial effusion 
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 HP:0001712 Left ventricular hypertrophy 
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 HP:0001714 Ventricular hypertrophy 
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 HP:0001733 Pancreatitis 
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 HP:0001735 Pancreatitis, acute 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001760 Abnormality of the feet "An abnormality of the feet (foot deformity) is a disorder of the foot that can either be congenital or acquired. Such deformities can include hammer toe, club foot deformity, flat feet, pes cavus, Congenital vertical talus (rocker bottom foot) & etc." [HPO:curators]
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 HP:0001761 Pes cavus 
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0001771 Achilles tendon contractures 
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 HP:0001788 Premature rupture of membranes "Premature rupture of membranes (PROM) is a condition which occurs in pregnancy when the amniotic sac ruptures more than an hour before the onset of labor." [HPO:probinson]
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 HP:0001799 Short nails 
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 HP:0001808 Fragile nails 
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 HP:0001816 Thin nails 
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 HP:0001838 Vertical talus 
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 HP:0001870 Acroosteolysis of distal phalanges (feet) 
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 HP:0001883 Talipes 
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 HP:0001894 Thrombocytosis 
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002097 Emphysema 
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 HP:0002136 Broad-based gait "An abnormal gait pattern in which persons stand and walk with their feet spaced widely apart. This is often a component of cerebellar ataxia." [HPO:curators]
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 HP:0002155 Hypertriglyceridemia 
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 HP:0002164 Nail dysplasia 
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 HP:0002170 Intracranial hemorrhage "A hemorrhage (bleeding) occuring within the skull." [HPO:curators]
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 HP:0002209 Sparse scalp hair "Sparseness of the `head hair` (FMA:54241)." [HPO:probinson]
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 HP:0002211 White forelock 
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 HP:0002216 Premature graying of hair 
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 HP:0002223 Absent eyebrows 
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 HP:0002230 Generalized hirsutism "Abnormally increased hair growth over much of the entire body." [HPO:curators]
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 HP:0002231 Sparse body hair "Sparseness of the body hair." [HPO:probinson]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002289 Alopecia, complete 
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 HP:0002326 Transient ischemic attack 
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 HP:0002355 Difficulty walking 
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 HP:0002421 Poor head control 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002515 Waddling gait 
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 HP:0002557 Hypoplastic nipples 
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 HP:0002616 Aortic root dilatation 
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 HP:0002621 Atherosclerosis "A condition characterized by patchy atheromas or atherosclerotic plaques which develop in the walls of medium-sized and large arteries and can lead to arterial stenosis with reduced or blocked blood flow." [HPO:curators]
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 HP:0002645 Wormian bones 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002669 Osteogenic sarcoma 
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 HP:0002671 Basal cell carcinoma 
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 HP:0002692 Hypoplastic facial bones 
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 HP:0002747 Respiratory insufficiency due to muscle weakness 
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 HP:0002751 Kyphoscoliosis 
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 HP:0002753 Thin bony cortex "Abnormal thinning of the cortical region of bones." [HPO:curators]
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 HP:0002758 Osteoarthritis 
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 HP:0002797 Osteolysis 
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 HP:0002804 Arthrogryposis multiplex congenita 
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 HP:0002808 Kyphosis 
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 HP:0002827 Dislocated hips 
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 HP:0002828 Multiple joint contractures 
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 HP:0002829 Arthralgia 
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 HP:0002858 Meningioma 
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 HP:0002905 Hyperphosphatemia 
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 HP:0002936 Distal sensory impairment 
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 HP:0002987 Elbow contractures 
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 HP:0003016 Metaphyseal widening "Abnormal widening of the metaphyseal regions of long bones." [HPO:curators]
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 HP:0003074 Hyperglycemia 
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 HP:0003076 Glycosuria "The excretion of abnormal amounts of glucose in the urine, generally resulting in osmotic diuresis." [HPO:curators]
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 HP:0003077 Hyperlipidemia 
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 HP:0003124 Hypercholesterolemia 
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 HP:0003141 Increased beta-lipoproteins "An increase in the blood concentration of beta lipoprotein, which is a low-density lipoprotein involved in the blood transport of cholesterol." [HPO:curators]
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 HP:0003198 Myopathy 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003233 Decreased HDL cholesterol 
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003292 Decreased serum leptin 
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 HP:0003300 Ovoid vertebral bodies 
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 HP:0003306 Spinal rigidity 
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 HP:0003307 Hyperlordosis 
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 HP:0003325 Limb-girdle muscle weakness "Weakness of the limb-girdle muscles (also known as the pelvic and shoulder girdles), that is, lack of strength of the muscles around the shoulders and the pelvis." [HPO:curators]
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 HP:0003326 Myalgia "A tendency to experience muscle pain." [HPO:curators]
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 HP:0003327 Axial muscle weakness "Reduced strength of the axial musculature (i.e., of the muscles of the head and neck, spine, and ribs)." [HPO:curators]
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 HP:0003355 Abnormal urinary amino-acid findings 
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 HP:0003376 Steppage gait "An abnormal gait pattern that arises from weakness of the pretibial and peroneal muscles due to a lower motor neuron lesion. Affected patients have footdrop and are unable to dorsiflex and evert the foot. The leg is lifted high on walking so that the toes clear the ground, and there may be a slapping noise when the foot strikes the ground again." [HPO:curators]
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 HP:0003378 Axonal degeneration/regeneration on nerve biopsy 
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 HP:0003380 Decreased number of myelinated fibers "A loss of myelinated nerve fibers (in general, this finding can be observed on nerve biopsy)." [HPO:curators]
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 HP:0003383 Onion bulb formations on nerve biopsy 
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 HP:0003384 Axonal atrophy on nerve biopsy 
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 HP:0003431 Decreased motor nerve conduction velocity (NCV) 
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 HP:0003457 Abnormal EMG findings "Abnormal results of investigations using electromyography (EMG)." [HPO:curators]
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 HP:0003458 EMG myopathic abnormalities "The presence of abnormal electromyographic patterns indicative of myopathy, such as small-short polyphasic motor unit potentials." [HPO:curators]
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 HP:0003484 Upper limb involvement may occur later 
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 HP:0003547 Shoulder girdle muscle weakness "The shoulder, or pectoral, girdle is composed of the clavicles and the scapulae. Shoulder-girdle weakness refers to lack of strength of the muscles attaching to these bones, that is, lack of strength of the muscles around the shoulders." [HPO:curators]
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 HP:0003551 Difficulty climbing stairs 
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 HP:0003560 Muscular dystrophy "The term dystrophy means abnormal growth. However, muscular dystrophy is used to describe primary myopathies with a genetic basis and a progressive course characterized by progressive skeletal muscle weakness, defects in muscle proteins, and the apoptosis of muscle cells." [HPO:curators]
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 HP:0003621 Juvenile onset 
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 HP:0003635 Loss of subcutaneous adipose tissue in limbs 
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 HP:0003674 Age of onset 
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 HP:0003676 Progressive disorder 
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 HP:0003677 Slow progression 
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 HP:0003691 Scapular winging 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003700 Generalized amyotrophy "Generalized wasting of loss of muscle tissue." [HPO:curators]
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0003712 Muscle hypertrophy "Hypertrophy (increase in size) of muscle cells (as opposed to hyperplasia, which refers to an increase in the number of muscle cells)." [HPO:curators]
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 HP:0003717 Minimal subcutaneous fat 
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 HP:0003738 Exercise-induced myalgia "The occurrence of an unusually high amount of muscle pain following exercise." [HPO:curators]
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 HP:0003741 Congenital muscular dystrophy 
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 HP:0003749 Pelvic girdle muscle weakness "Weakness of the muscles of the pelvic girdle (also known as the hip girdle), that is, lack of strength of the muscles around the pelvis." [HPO:curators]
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 HP:0003758 Reduced subcutaneous adipose tissue "The presence of an abnormally reduced amount of subcutaneous adipose tissue." [HPO:curators]
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 HP:0003761 Calcinosis "Formation of calcium deposits in any soft tissue." [HPO:curators]
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 HP:0003777 Pili torti "Pili (from Latin pilus, hair) torti (from Latin tortus, twisted) refers to short and brittle hairs that appear flattened and twisted when viewed through a microscope." [HPO:curators]
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 HP:0003797 Limb-girdle muscle atrophy "Muscular atrophy affecting the muscles of the limb girdle." [HPO:curators]
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 HP:0003826 Stillborn or neonatal death 
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 HP:0003828 Variable expressivity 
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 HP:0004054 Sclerosis of hand bones "Osteosclerosis affecting one or more bones of the hand." [HPO:curators]
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 HP:0004279 Hypoplastic hand 
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 HP:0004308 Ventricular arrhythmia 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004326 Cachexia 
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 HP:0004331 Decreased skull ossification "A reduction in the magnitude or amount of ossification of the skull." [HPO:curators]
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 HP:0004334 Dermal atrophy "Partial or complete wasting (atrophy) of the skin." [HPO:curators]
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 HP:0004361 Abnormal regulation of fat tissue metabolism 
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 HP:0004380 Aortic valve calcification 
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 HP:0004382 Mitral valve calcification 
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 HP:0004388 Microcolon 
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 HP:0004414 Abnormality of the pulmonary artery 
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 HP:0004416 Precocious atherosclerosis 
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 HP:0004417 Intermittent claudication 
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 HP:0004492 Widely patent fontanels and sutures "An abnormally increased width of the cranial sutures of striking degree." [HPO:curators]
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 HP:0004631 Decreased cervical spine flexion due to contractures of posterior cervical muscles 
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 HP:0004749 Atrial fibrillation or flutter 
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 HP:0004931 small cerebral arteries show arteriosclerotic changes 
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 HP:0004943 Accelerated atherosclerosis 
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 HP:0004950 Peripheral arterial disease 
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 HP:0004970 Ascending aortic dilation 
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 HP:0005109 Abnormality of the Achilles tendon 
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 HP:0005110 Atrial fibrillation 
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 HP:0005115 Supraventricular arrhythmia 
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 HP:0005150 Atrioventricular conduction disturbances 
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 HP:0005177 Premature arteriosclerosis 
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 HP:0005181 Premature coronary artery disease 
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 HP:0005253 Increased anterioposterior diameter of chest 
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 HP:0005267 Premature delivery because of cervical insufficiency or membrane fragility 
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 HP:0005328 Progeroid facial appearance 
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 HP:0005339 Abnormality of complement 
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 HP:0005461 Craniofacial disproportion 
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 HP:0005474 Poorly ossified calvaria "Abnormal reduction in ossification of the calvaria (roof of the skull consisting of the frontal bone, parietal bones, temporal bones, and occipital bone)." [HPO:curators]
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 HP:0005595 Hyperkeratosis, generalized 
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 HP:0005659 Thoracic kyphoscoliosis 
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 HP:0005692 Joint hyperflexibility 
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 HP:0005978 Noninsulin-dependent diabetes mellitus 
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 HP:0005997 Restricted neck movement due to contractures 
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 HP:0006224 Tapered, pointed distal phalanges 
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 HP:0006266 Small or abnormal placenta 
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 HP:0006267 Placental enlargement 
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 HP:0006288 Premature eruption of teeth 
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 HP:0006391 Overtubulated long bones 
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 HP:0006480 Premature loss of teeth 
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 HP:0006585 Thin, dysplastic bipartite clavicles 
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 HP:0006645 Thin, long clavicles 
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 HP:0006660 Aplastic clavicles 
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 HP:0006710 Aplasia/Hypoplasia of the clavicles "Absence or underdevelopment of the clavicles (collar bones)." [HPO:curators]
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 HP:0006739 Squamous cell carcinoma of the skin "Squamous cell carcinoma of the skin is a malignant tumor of squamous epithelium." [HPO:curators]
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 HP:0006766 Papillary renal cell carcinoma 
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 HP:0006785 Limb-girdle muscular dystrophy "Muscular dystrophy affecting the muscles of the limb girdle (the hips and shoulders)." [HPO:curators]
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 HP:0006824 Cranial nerve paralysis 
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 HP:0006829 Severe muscular hypotonia "A severe degree of muscular hypotonia characterized by markedly reduced muscle tone." [HPO:curators]
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 HP:0007394 Prominent superficial blood vessels 
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 HP:0007427 Reticulated skin pigmentation 
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 HP:0007485 Absence of subcutaneous fat 
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 HP:0007509 Patchy hypo- and hyperpigmentation 
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 HP:0007543 Epidermal hyperkeratosis 
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 HP:0007592 Hypoplastic-absent eccrine sweat glands 
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 HP:0007618 Subcutaneous calcification 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0008069 Neoplasia of the skin 
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 HP:0008070 Sparse hair 
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 HP:0008151 Prolonged prothrombin and partial thromboplastin times 
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 HP:0008180 Mildly elevated creatine phosphokinase 
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 HP:0008197 Absence of pubertal development 
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 HP:0008209 Premature ovarian failure 
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 HP:0008214 Decreased serum estradiol 
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 HP:0008230 Decreased testosterone in males 
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 HP:0008244 Congenital adrenal gland hypoplasia 
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 HP:0008283 Hyperinsulinemia, fasting 
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 HP:0008419 Degeneration of intervertebral disks 
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 HP:0008739 Labial pseudohypertrophy 
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 HP:0008887 Adipose tissue loss 
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 HP:0008897 Growth retardation, progressive 
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 HP:0008944 Distal lower limb muscle weakness and atrophy "Amyotrophy of distal lower leg muscles with resultant weakness." [HPO:curators]
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 HP:0008946 Pelvic girdle weakness and atrophy 
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 HP:0008968 Muscle hypertrophy of the lower extremities "Muscle hypertrophy primarily affecting the legs." [HPO:curators]
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 HP:0008981 Muscular hypertrophy, esp calf muscles "Muscle hypertrophy primarily affecting the calf muscles." [HPO:curators]
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 HP:0008985 Increased intramuscular fat "An abnormal increase in the amount of intramuscular fat tissue." [HPO:curators]
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 HP:0008993 Increased intraabdominal fat "An abnormal increase in the amount of intraabdominal fat tissue." [HPO:curators]
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 HP:0008997 Proximal muscle weakness in upper limbs "A lack of strength of the proximal muscles of the arms." [HPO:curators]
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 HP:0009002 Loss of subcutaneous truncal adipose tissue 
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 HP:0009027 Foot dorsiflexor weakness 
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 HP:0009046 Difficulty walking, running, climbing stairs 
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 HP:0009049 Peroneal muscle atrophy "Atrophy of the peroneous muscles, `peroneus longus (also known as Fibularis longus) (FMA:22539), `Peroneus brevis (also known as fibularis brevis` (FMA:22540), and `Peroneus tertius (also known as fibularis tertius` (FMA:22538)." [HPO:probinson]
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 HP:0009064 Generalized lipodystrophy "Generalized degenerative changes of the fat tissue." [HPO:curators]
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 HP:0009125 Lipodystrophy "Degenerative changes of the fat tissue." [HPO:curators]
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 HP:0009726 Renal neoplasia "Tumors, malignant or benign, originating in the kidney." [HPO:curators]
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 HP:0009771 Osteolytic defects of the phalanges of the hand "Dissolution or degeneration of bone tissue of the phalanges of the hand." [HPO:curators]
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 HP:0009839 Osteolytic defects of the distal phalanges of the hand 
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 HP:0009882 Hypoplasia of the distal phalanges of the hand 
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 HP:0009906 Aplasia/Hypoplasia of the earlobes "Absence or underdevelopment of the ear lobes." [HPO:curators]
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 HP:0009924 Aplasia/Hypoplasia involving the nose "Underdevelopment or absence of the nose or parts thereof." [HPO:curators]
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 HP:0010219 structural foot deformity "A foot deformity resulting due to an abnormality affecting the bones of the foot (as well as muscle and soft tissue). In contrast if only the muscle and soft tissue are affected the term positional foot deformity applies." [HPO:curators]
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 HP:0010239 Aplasia of the middle phalanges of the hand 
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 HP:0010648 Dermal translucency "An abnormally increased ability of the skin to permit light to pass through (translucency) such that subcutaneous structures such as veins display an increased degree of visibility." [HPO:curator]
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 HP:0010665 Bilateral coxa valga "The presence of bilateral `coxa_valga` (HP:0002673)." [HPO:probinson]
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 HP:0010721 Abnormal hair whorl "An abnormal hair whorl (that is, a patch of hair growing in the opposite direction of the rest of the hair)." [HPO:probinson]
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 HP:0011040 Abnormality of the intrahepatic bile duct "An abnormality of the `intrahepatic bile duct` (FMA:15766)." [HPO:probinson]
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0011356 Regional abnormality of skin "An abnormality of the skin that is restricted to a particular body region." [DDD:cmoss]
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 HP:0011414 Hydropic placenta "An abnormality of the placenta in which there are numerous cystic spaces within the placenta as well as placental enlargement." [HPO:hfirth]
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 HP:0011675 Arrhythmia "Any cardiac rhythm other than the normal sinus rhythm. Such a rhythm may be either of sinus or ectopic origin and either regular or irregular. An arrhythmia may be due to a disturbance in impulse formation or conduction or both." [DDD:dbrown, pmid:19063792]
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 HP:0011702 Abnormal electrophysiology of sinoatrial node origin "An abnormality of the sinoatrial (SA) node in the right atrium. THe SA node acts as the pacemaker of the heart." [HPO:probinson]
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 HP:0011703 Sinus tachycardia "Inappropriate sinus tachycardia is a nonparoxysmal tachyarrhythmia characterized by an increased resting heart rate (HR) and/or an exaggerated HR response to minimal exertion or a change in body posture. HR is constantly above the physiological range with no appropriate relation to metabolic or physiological demands." [HPO:probinson, pmid:15763524]
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 HP:0011727 Peroneal muscle weakness "Weakness of the peroneal muscles." [HPO:probinson]
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 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
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 HP:0011832 Narrow nasal tip "Decrease in width of the nasal tip." [pmid:19152422]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012084 Abnormality of skeletal muscle fiber size "Any abnormality of the size of the `skeletal muscle cell` (FMA:9727)." [HPO:probinson]
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 HP:0012397 Aortic atherosclerosis "The presence of atheromas or atherosclerotic plaques in the `aorta` (FMA:3734)." [HPO:probinson, pmid:16818829]
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 HP:0012478 Temporomandibular joint ankylosis "Fusion of the mandibular condyle to the base of the skull, resulting in limitation of jaw opening." [ORCID:0000-0001-5208-3432]
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 HP:0012645 Enlarged peripheral nerve "Increase in size of a peripheral nerve. This finding can be appreciated by palpation along the axis of the nerve." [HPO:probinson]
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 HP:0012745 Short palpebral fissure "Distance between the medial and lateral canthi is more than 2 SD below the mean for age (objective); or, apparently reduced length of the palpebral fissures." [pmid:19125427]
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 HP:0025354 Abnormal cellular phenotype "An anomaly of cellular morphology or physiology." []
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 HP:0030053 Stiff skin "An induration (hardening) of the skin" []
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 HP:0030084 Clinodactyly "An angulation of a digit at an interphalangeal joint in the plane of the palm (finger) or sole (toe)." [pmid:16252026]
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 HP:0030200 Fatiguable weakness of proximal limb muscles "A type of weakness of a skeletal muscle of proximal part of a limb that occurs after a muscle group is used and lessens if the muscle group has some rest. That is, there is diminution of strength with repetitive muscle actions." [UK:rheller]
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 HP:0030445 Pulmonary carcinoid tumor "A malignant neuroendocrine tumor of the lung. According to histopathologic criteria (WHO 2004), carcinoids are divided into four groups i.e. typical and atypical carcinoids, large cell neuroendocrine carcinoma and small cell lung carcinoma." [HPO:probinson, pmid:21043816, pmid:24179657]
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 HP:0030685 Decreased adiponectin level "A reduced circulating concentration of adiponectin, a 30-kDa complement C1-related protein that is the most abundant secreted protein expressed in adipose tissue." [HPO:probinson]
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 HP:0040019 Finger clinodactyly 
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 HP:0040160 Generalized osteoporosis 
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 HP:0040189 Scaling skin "Refers to the loss of the outer layer of the epidermis in large, scale-like flakes." []
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 HP:0040266 Proximal upper limb muscle hypertrophy 
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 HP:0045075 Sparse eyebrow "Decreased density/number of eyebrow hairs." [HPO:skoehler]
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 HP:0100013 Neoplasia of the breast 
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 HP:0100031 Neoplasm of the thyroid gland "The presence of a `neoplasm` (MPATH:218) of the `thyroid gland` (FMA:9603)." [HPO:probinson]
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 HP:0100324 Scleroderma "A chronic autoimmune disease characterized by fibrosis (or hardening), vascular alterations, and autoantibodies." [HPO:sdoelken]
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 HP:0100362 Aplasia of the phalanges of the 3rd toe 
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 HP:0100490 Camptodactyly (hands) "Contractures of one ore more joints of the fingers." [HPO:sdoelken]
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 HP:0100526 Neoplasia of the lungs 
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 HP:0100546 Carotid stenosis 
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 HP:0100578 Lipoatrophy "Localized loss of fat tissue." [HPO:sdoelken]
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 HP:0100585 Teleangiectasia of the skin 
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 HP:0100601 Ecplampsia "An acute and life-threatening complication of pregnancy, which is characterized by the appearance of tonic-clonic seizures, usually in a patient who had developed pre-eclampsia. Eclampsia includes seizures and coma that happen during pregnancy but are not due to preexisting or organic brain disorders." [HPO:sdoelken]
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 HP:0100607 Dysmenorrhea 
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 HP:0100615 Ovarian neoplasm "The presence of a `neoplasm` (MPATH:218) the `ovary` (FMA:7209)." [HPO:probinson]
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 HP:0100649 Neoplasia of the oral cavity 
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 HP:0100658 Cellulitis 
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 HP:0100659 Abnormality of the cerebral vasculature 
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 HP:0100671 Abnormality of bone trabeculation 
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 HP:0100678 Wrinkled skin 
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 HP:0100679 Lack of skin elasticity 
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 HP:0100783 Breast aplasia 
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 HP:0100820 Glomerulopathy "Inflammatory or noninflammatory diseases affecting the glomeruli of the nephron." [HPO:sdoelken]
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 HP:0100833 Neoplasm of the small intestine "The presence of a `neoplasm` (MPATH:218) of the small intestine." [HPO:probinson]
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 HP:0100840 Aplasia/Hypoplasia of the eyebrow "Absence or underdevelopment of the eyebrow." [HPO:probinson]
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 HP:0200021 Rounded shoulders 
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 HP:0200041 skin erosion "A discontinuity of the skin exhibiting incomplete loss of the epidermis, a lesion that is moist, circumscribed, and usually depressed." [HPO:SKOEHLER]
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 HP:0200042 skin ulcer "A discontinuity of the skin exhibiting complete loss of the epidermis and often portions of the dermis and even subcutaneous fat." [HPO:SKOEHLER]
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 HP:0200102 Sparse/absent eyelashes 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000100749 VRK1 / Q99986 / vaccinia related kinase 1  / reaction
 ENSG00000138794 CASP6 / P55212 / caspase 6  / reaction
 ENSG00000134057 CCNB1 / P14635 / cyclin B1  / reaction
 ENSG00000166501 PRKCB / P05771 / protein kinase C beta  / reaction
 ENSG00000164885 CDK5 / Q00535 / cyclin dependent kinase 5  / reaction
 ENSG00000154229 PRKCA / P17252 / protein kinase C alpha  / reaction
 ENSG00000170312 CDK1 / P06493 / cyclin dependent kinase 1  / reaction
 ENSG00000102119 EMD / emerin / P50402  / complex / reaction
 ENSG00000175334 BANF1 / O75531 / barrier to autointegration factor 1  / reaction / complex
 ENSG00000160789 LMNA / P02545 / lamin A/C  / complex / -






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
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