ENSG00000176619


Homo sapiens

Features
Gene ID: ENSG00000176619
  
Biological name :LMNB2
  
Synonyms : lamin B2 / LMNB2 / Q03252
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: p13.3
Gene start: 2427638
Gene end: 2456996
  
Corresponding Affymetrix probe sets: 216952_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000327054
NCBI entrez gene - 84823     See in Manteia.
OMIM - 150341
RefSeq - NM_032737
RefSeq Peptide - NP_116126
swissprot - Q03252
Ensembl - ENSG00000176619
  
Related genetic diseases (OMIM): 608709 - {Lipodystrophy, partial, acquired, susceptibility to}, 608709
  616540 - ?Epilepsy, progressive myoclonic, 9, 616540
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lmnb2ENSDARG00000101624Danio rerio
 LMNB2ENSGALG00000000470Gallus gallus
 Lmnb2ENSMUSG00000062075Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LMNB1 / P20700 / lamin B1ENSG0000011336856
LMNA / P02545 / lamin A/CENSG0000016078951
NEFH / P12036 / neurofilament heavyENSG0000010028523
NEFM / P07197 / neurofilament mediumENSG0000010472223
VIM / P08670 / vimentinENSG0000002602521
PRPH / P41219 / peripherinENSG0000013540621
DES / desmin / P17661ENSG0000017508421
GFAP / P14136 / glial fibrillary acidic proteinENSG0000013109520
NEFL / P07196 / neurofilament lightENSG0000027758620
INA / Q16352 / internexin neuronal intermediate filament protein alphaENSG0000014879820


Protein motifs (from Interpro)
Interpro ID Name
 IPR001322  Lamin tail domain
 IPR001664  Intermediate filament protein
 IPR018039  Intermediate filament protein, conserved site
 IPR036415  Lamin tail domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005637 nuclear inner membrane IEA
 cellular_componentGO:0005638 lamin filament IEA
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031965 nuclear membrane IDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000093 Proteinuria 
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 HP:0000171 Microglossia 
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 HP:0000365 Hearing loss 
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 HP:0000855 Insulin resistance 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001397 Hepatic steatosis 
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 HP:0002066 Gait ataxia "Impairment of the ability to coordinate the movements required for normal walking." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002133 Status epilepticus 
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 HP:0002230 Generalized hirsutism "Abnormally increased hair growth over much of the entire body." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002721 Immunodeficiency 
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 HP:0002829 Arthralgia 
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 HP:0002907 Microscopic hematuria 
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 HP:0002960 Autoimmune disease 
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 HP:0003198 Myopathy 
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 HP:0003676 Progressive disorder 
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 HP:0003700 Generalized amyotrophy "Generalized wasting of loss of muscle tissue." [HPO:curators]
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 HP:0005328 Progeroid facial appearance 
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 HP:0005421 Decreased serum complement C3 
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 HP:0009778 Hypoplastic/small thumb 
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 HP:0100578 Lipoatrophy "Localized loss of fat tissue." [HPO:sdoelken]
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 HP:0100820 Glomerulopathy "Inflammatory or noninflammatory diseases affecting the glomeruli of the nephron." [HPO:sdoelken]
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 HP:0100827 Lymphocytosis "Increase in the number or proportion of lymphocytes in the blood." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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