ENSGALG00000000470


Gallus gallus

Features
Gene ID: ENSGALG00000000470
  
Biological name :LMNB2
  
Synonyms : lamin-B2 / LMNB2
  
Possible biological names infered from orthology : P21619 / Q03252
  
Species: Gallus gallus
  
Chr. number: 28
Strand: -1
Band:
Gene start: 623375
Gene end: 649206
  
Corresponding Affymetrix probe sets: Gga.1297.1.S1_at (Chicken Array)   Gga.16090.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000000639
NCBI entrez gene - 396222     See in Manteia.
RefSeq - NM_205285
RefSeq Peptide - NP_990616
swissprot - F1NP51
Ensembl - ENSGALG00000000470
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lmnb2ENSDARG00000101624Danio rerio
 LMNB2ENSG00000176619Homo sapiens
 Lmnb2ENSMUSG00000062075Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LMNB1 / lamin-B1 / P14733* / P20700*ENSGALG0000001469256
LMNA* / P02545* / P48678* / lamin A/C* / Prelamin-A/C Lamin-A/C*ENSGALG0000000608343
DES / desmin / P17661* / P31001*ENSGALG0000001130622
NEFL / neurofilament light / P07196* / P08551* / Neurofilament light polypeptide *ENSGALG0000000031422
VIM / vimentin / P08670* / P20152*ENSGALG0000000867721
NEFM / neurofilament medium polypeptide / P07197* / neurofilament medium*ENSGALG0000000031721
GFAP / glial fibrillary acidic protein / P03995* / P14136*ENSGALG0000000090921
NEFH / neurofilament heavy / P12036* / P19246* / Neurofilament heavy polypeptide *ENSGALG0000000808518


Protein motifs (from Interpro)
Interpro ID Name
 IPR001322  Lamin tail domain
 IPR001664  Intermediate filament protein
 IPR018039  Intermediate filament protein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005638 lamin filament IEA
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr