ENSGALG00000000909


Gallus gallus

Features
Gene ID: ENSGALG00000000909
  
Biological name :GFAP
  
Synonyms : GFAP / glial fibrillary acidic protein
  
Possible biological names infered from orthology : P03995 / P14136
  
Species: Gallus gallus
  
Chr. number: 27
Strand: -1
Band:
Gene start: 1466576
Gene end: 1470293
  
Corresponding Affymetrix probe sets: Gga.7317.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001335
NCBI entrez gene - 419969     See in Manteia.
RefSeq - XM_418091
swissprot - F1NE70
Ensembl - ENSGALG00000000909
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gfapENSDARG00000025301Danio rerio
 GFAPENSG00000131095Homo sapiens
 GfapENSMUSG00000020932Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VIM / vimentin / P08670* / P20152*ENSGALG0000000867756
DES / desmin / P17661* / P31001*ENSGALG0000001130655
NEFM / neurofilament medium polypeptide / P07197* / neurofilament medium*ENSGALG0000000031743
NEFL / neurofilament light / P07196* / P08551* / Neurofilament light polypeptide *ENSGALG0000000031443
NEFH / neurofilament heavy / P12036* / P19246* / Neurofilament heavy polypeptide *ENSGALG0000000808535
LMNB2 / lamin-B2 / P21619* / Q03252*ENSGALG0000000047030
LMNB1 / lamin-B1 / P14733* / P20700*ENSGALG0000001469226
LMNA* / P02545* / P48678* / lamin A/C* / Prelamin-A/C Lamin-A/C*ENSGALG0000000608325


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR006821  Intermediate filament head, DNA-binding domain
 IPR018039  Intermediate filament protein, conserved site
 IPR027701  Glial fibrillary acidic protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010625 positive regulation of Schwann cell proliferation IEA
 biological_processGO:0010977 negative regulation of neuron projection development IEA
 biological_processGO:0014002 astrocyte development IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0031102 neuron projection regeneration IEA
 biological_processGO:0045103 intermediate filament-based process IEA
 biological_processGO:0045109 intermediate filament organization IEA
 biological_processGO:0051580 regulation of neurotransmitter uptake IEA
 biological_processGO:0060020 Bergmann glial cell differentiation IEA
 biological_processGO:0060291 long-term synaptic potentiation IEA
 biological_processGO:1904714 regulation of chaperone-mediated autophagy IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005623 cell IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043209 myelin sheath IEA
 cellular_componentGO:0044297 cell body IEA
 cellular_componentGO:0097386 glial cell projection IEA
 cellular_componentGO:0097449 astrocyte projection IEA
 cellular_componentGO:0097450 astrocyte end-foot IEA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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