ENSGALG00000000317


Gallus gallus

Features
Gene ID: ENSGALG00000000317
  
Biological name :NEFM
  
Synonyms : NEFM / neurofilament medium polypeptide
  
Possible biological names infered from orthology : neurofilament medium / P07197
  
Species: Gallus gallus
  
Chr. number: 22
Strand: -1
Band:
Gene start: 961851
Gene end: 965751
  
Corresponding Affymetrix probe sets: Gga.4179.1.S1_at (Chicken Array)   GgaAffx.11126.1.A1_s_at (Chicken Array)   GgaAffx.25580.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000000422
NCBI entrez gene - 396206     See in Manteia.
RefSeq - NM_001101730
RefSeq Peptide - NP_001095200
swissprot - F1NUT7
Ensembl - ENSGALG00000000317
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nefmaENSDARG00000021351Danio rerio
 nefmbENSDARG00000043697Danio rerio
 NEFMENSG00000104722Homo sapiens
 NefmENSMUSG00000022054Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NEFH / neurofilament heavy / P12036* / P19246* / Neurofilament heavy polypeptide *ENSGALG0000000808531
NEFL / neurofilament light / P07196* / P08551* / Neurofilament light polypeptide *ENSGALG0000000031428
VIM / vimentin / P08670* / P20152*ENSGALG0000000867722
DES / desmin / P17661* / P31001*ENSGALG0000001130622
GFAP / glial fibrillary acidic protein / P03995* / P14136*ENSGALG0000000090921
LMNB2 / lamin-B2 / P21619* / Q03252*ENSGALG0000000047015
LMNA* / P02545* / P48678* / lamin A/C* / Prelamin-A/C Lamin-A/C*ENSGALG0000000608314
LMNB1 / lamin-B1 / P14733* / P20700*ENSGALG0000001469214


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR002957  Keratin, type I
 IPR006821  Intermediate filament head, DNA-binding domain
 IPR018039  Intermediate filament protein, conserved site
 IPR027697  Neurofilament medium polypeptide


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0061564 axon development IEA
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0005883 neurofilament IEA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IEA
 cellular_componentGO:0097418 neurofibrillary tangle IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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