ENSGALG00000006083


Gallus gallus

Features
Gene ID: ENSGALG00000006083
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : lamin A/C / LMNA / P02545 / P48678 / Prelamin-A/C Lamin-A/C
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 11457278
Gene end: 11468961
  
Corresponding Affymetrix probe sets: GgaAffx.3792.1.S1_at (Chicken Array)   GgaAffx.3792.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009801
NCBI entrez gene - 415464     See in Manteia.
RefSeq - XM_015292030
RefSeq - XM_015292031
swissprot - F1N8X2
Ensembl - ENSGALG00000006083
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lmnl3ENSDARG00000007751Danio rerio
 LMNAENSG00000160789Homo sapiens
 LmnaENSMUSG00000028063Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LMNB1 / lamin-B1 / P14733* / P20700*ENSGALG0000001469245
LMNB2 / lamin-B2 / P21619* / Q03252*ENSGALG0000000047043
NEFL / neurofilament light / P07196* / P08551* / Neurofilament light polypeptide *ENSGALG0000000031421
NEFM / neurofilament medium polypeptide / P07197* / neurofilament medium*ENSGALG0000000031720
DES / desmin / P17661* / P31001*ENSGALG0000001130619
GFAP / glial fibrillary acidic protein / P03995* / P14136*ENSGALG0000000090918
NEFH / neurofilament heavy / P12036* / P19246* / Neurofilament heavy polypeptide *ENSGALG0000000808518
VIM / vimentin / P08670* / P20152*ENSGALG0000000867718


Protein motifs (from Interpro)
Interpro ID Name
 IPR001322  Lamin tail domain
 IPR001664  Intermediate filament protein
 IPR018039  Intermediate filament protein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005882 intermediate filament IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
Breakdown of the nuclear lamina


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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