ENSG00000131095


Homo sapiens

Features
Gene ID: ENSG00000131095
  
Biological name :GFAP
  
Synonyms : GFAP / glial fibrillary acidic protein / P14136
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q21.31
Gene start: 44903161
Gene end: 44916937
  
Corresponding Affymetrix probe sets: 203540_at (Human Genome U133 Plus 2.0 Array)   222197_s_at (Human Genome U133 Plus 2.0 Array)   229259_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000467106
Ensembl peptide - ENSP00000466598
Ensembl peptide - ENSP00000467397
Ensembl peptide - ENSP00000492860
Ensembl peptide - ENSP00000492832
Ensembl peptide - ENSP00000492432
Ensembl peptide - ENSP00000492300
Ensembl peptide - ENSP00000492156
Ensembl peptide - ENSP00000491735
Ensembl peptide - ENSP00000491466
Ensembl peptide - ENSP00000491375
Ensembl peptide - ENSP00000491243
Ensembl peptide - ENSP00000491088
Ensembl peptide - ENSP00000491042
Ensembl peptide - ENSP00000468500
Ensembl peptide - ENSP00000467530
Ensembl peptide - ENSP00000253408
Ensembl peptide - ENSP00000366189
Ensembl peptide - ENSP00000403962
Ensembl peptide - ENSP00000465208
Ensembl peptide - ENSP00000465320
Ensembl peptide - ENSP00000465565
Ensembl peptide - ENSP00000465629
Ensembl peptide - ENSP00000466163
NCBI entrez gene - 2670     See in Manteia.
OMIM - 137780
RefSeq - XM_017024451
RefSeq - NM_001131019
RefSeq - NM_001242376
RefSeq - NM_002055
RefSeq Peptide - NP_002046
RefSeq Peptide - NP_001124491
RefSeq Peptide - NP_001229305
swissprot - A0A1W2PQU7
swissprot - A0A1W2PQS4
swissprot - A0A1W2PQ25
swissprot - A0A1W2PPL2
swissprot - A0A1W2PPF0
swissprot - A0A1W2PPA3
swissprot - A0A1W2PP21
swissprot - K7EJK1
swissprot - K7EJU1
swissprot - K7EKD1
swissprot - K7EKH9
swissprot - K7ELP4
swissprot - K7EMP8
swissprot - K7EPI4
swissprot - K7EPT8
swissprot - P14136
swissprot - A0A0G2JLI8
swissprot - B4DIR1
swissprot - A0A1X7SCE1
swissprot - A0A1W2PS58
swissprot - A0A1X7SBR3
swissprot - A0A1W2PRT3
swissprot - A0A1W2PR46
Ensembl - ENSG00000131095
  
Related genetic diseases (OMIM): 203450 - Alexander disease, 203450
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gfapENSDARG00000025301Danio rerio
 GFAPENSGALG00000000909Gallus gallus
 GfapENSMUSG00000020932Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DES / desmin / P17661ENSG0000017508453
VIM / P08670 / vimentinENSG0000002602551
PRPH / P41219 / peripherinENSG0000013540650
INA / Q16352 / internexin neuronal intermediate filament protein alphaENSG0000014879842
NEFL / P07196 / neurofilament lightENSG0000027758640
NEFM / P07197 / neurofilament mediumENSG0000010472240
NEFH / P12036 / neurofilament heavyENSG0000010028538
LMNB2 / Q03252 / lamin B2ENSG0000017661928
LMNB1 / P20700 / lamin B1ENSG0000011336826
LMNA / P02545 / lamin A/CENSG0000016078926


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR006821  Intermediate filament head, DNA-binding domain
 IPR018039  Intermediate filament protein, conserved site
 IPR027697  Neurofilament medium polypeptide
 IPR027701  Glial fibrillary acidic protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009611 response to wounding IEA
 biological_processGO:0010625 positive regulation of Schwann cell proliferation IEA
 biological_processGO:0010977 negative regulation of neuron projection development IEA
 biological_processGO:0014002 astrocyte development IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0031102 neuron projection regeneration IEA
 biological_processGO:0043254 regulation of protein complex assembly TAS
 biological_processGO:0045103 intermediate filament-based process IEA
 biological_processGO:0045109 intermediate filament organization IDA
 biological_processGO:0051580 regulation of neurotransmitter uptake IEA
 biological_processGO:0060020 Bergmann glial cell differentiation IEA
 biological_processGO:0060252 positive regulation of glial cell proliferation IEA
 biological_processGO:0060291 long-term synaptic potentiation IEA
 biological_processGO:0061564 axon development IEA
 biological_processGO:1904714 regulation of chaperone-mediated autophagy TAS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005764 lysosome ISS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0005883 neurofilament IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043209 myelin sheath IEA
 cellular_componentGO:0044297 cell body IEA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IDA
 cellular_componentGO:0097386 glial cell projection IEA
 cellular_componentGO:0097449 astrocyte projection IEA
 cellular_componentGO:0097450 astrocyte end-foot IEA
 cellular_componentGO:0098574 cytoplasmic side of lysosomal membrane IEA
 molecular_functionGO:0005178 integrin binding IEA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019900 kinase binding IEA
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
Nuclear signaling by ERBB4


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000238 Hydrocephalus 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
Show

 HP:0002376 Developmental regression 
Show

 HP:0002483 Bulbar signs 
Show

 HP:0002922 Increased CSF protein 
Show

 HP:0003593 Early onset 
Show

 HP:0004481 Macrocephaly, progressive "The progressive development of an abnormally large skull." [HPO:curators]
Show

 HP:0007162 Neuropathology shows diffuse demyelination of the cerebral white matter 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr