ENSG00000102678


Homo sapiens

Features
Gene ID: ENSG00000102678
  
Biological name :FGF9
  
Synonyms : FGF9 / fibroblast growth factor 9 / P31371
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: 1
Band: q12.11
Gene start: 21671383
Gene end: 21704498
  
Corresponding Affymetrix probe sets: 206404_at (Human Genome U133 Plus 2.0 Array)   239178_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000371790
NCBI entrez gene - 2254     See in Manteia.
OMIM - 600921
RefSeq - NM_002010
RefSeq Peptide - NP_002001
swissprot - P31371
Ensembl - ENSG00000102678
  
Related genetic diseases (OMIM): 612961 - Multiple synostoses syndrome 3, 612961
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FGF9ENSGALG00000025748Gallus gallus
 Fgf9ENSMUSG00000021974Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FGF20 / Q9NP95 / fibroblast growth factor 20ENSG0000007857971
FGF16 / O43320 / fibroblast growth factor 16ENSG0000019646870
FGF3 / P11487 / fibroblast growth factor 3ENSG0000018689535
FGF10 / O15520 / fibroblast growth factor 10ENSG0000007019331
FGF5 / P12034 / fibroblast growth factor 5ENSG0000013867531
FGF14 / Q92915 / fibroblast growth factor 14ENSG0000010246631
FGF13 / Q92913 / fibroblast growth factor 13ENSG0000012968231
FGF12 / P61328 / fibroblast growth factor 12ENSG0000011427930
FGF11 / Q92914 / fibroblast growth factor 11ENSG0000016195830
FGF6 / P10767 / fibroblast growth factor 6ENSG0000011124130
FGF22 / Q9HCT0 / fibroblast growth factor 22ENSG0000007038830
FGF4 / P08620 / fibroblast growth factor 4ENSG0000007538830
FGF7 / P21781 / fibroblast growth factor 7ENSG0000014028529


Protein motifs (from Interpro)
Interpro ID Name
 IPR002209  Fibroblast growth factor family
 IPR008996  Cytokine IL1/FGF
 IPR028251  Fibroblast growth factor 9


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0000165 MAPK cascade TAS
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0001649 osteoblast differentiation IEA
 biological_processGO:0001654 eye development IEA
 biological_processGO:0002053 positive regulation of mesenchymal cell proliferation IEA
 biological_processGO:0002062 chondrocyte differentiation IEA
 biological_processGO:0006606 protein import into nucleus IEA
 biological_processGO:0007165 signal transduction TAS
 biological_processGO:0007267 cell-cell signaling IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0008543 fibroblast growth factor receptor signaling pathway IGI
 biological_processGO:0008584 male gonad development IEA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0018108 peptidyl-tyrosine phosphorylation IEA
 biological_processGO:0021762 substantia nigra development HEP
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030178 negative regulation of Wnt signaling pathway IEA
 biological_processGO:0030238 male sex determination IEA
 biological_processGO:0030324 lung development IEA
 biological_processGO:0030326 embryonic limb morphogenesis IEA
 biological_processGO:0030949 positive regulation of vascular endothelial growth factor receptor signaling pathway IEA
 biological_processGO:0032927 positive regulation of activin receptor signaling pathway IEA
 biological_processGO:0036092 phosphatidylinositol-3-phosphate biosynthetic process IEA
 biological_processGO:0042472 inner ear morphogenesis IEA
 biological_processGO:0043410 positive regulation of MAPK cascade IEA
 biological_processGO:0045880 positive regulation of smoothened signaling pathway IEA
 biological_processGO:0046854 phosphatidylinositol phosphorylation IEA
 biological_processGO:0048505 regulation of timing of cell differentiation IEA
 biological_processGO:0048566 embryonic digestive tract development IEA
 biological_processGO:0048706 embryonic skeletal system development IEA
 biological_processGO:0050679 positive regulation of epithelial cell proliferation IEA
 biological_processGO:0051781 positive regulation of cell division IEA
 biological_processGO:0051897 positive regulation of protein kinase B signaling TAS
 biological_processGO:0060045 positive regulation of cardiac muscle cell proliferation IEA
 biological_processGO:0060484 lung-associated mesenchyme development IEA
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:0090263 positive regulation of canonical Wnt signaling pathway IEA
 biological_processGO:1904707 positive regulation of vascular smooth muscle cell proliferation IGI
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004713 protein tyrosine kinase activity TAS
 molecular_functionGO:0005088 Ras guanyl-nucleotide exchange factor activity TAS
 molecular_functionGO:0005104 fibroblast growth factor receptor binding IEA
 molecular_functionGO:0008083 growth factor activity TAS
 molecular_functionGO:0008201 heparin binding IEA
 molecular_functionGO:0016303 1-phosphatidylinositol-3-kinase activity TAS
 molecular_functionGO:0046934 phosphatidylinositol-4,5-bisphosphate 3-kinase activity TAS


Pathways (from Reactome)
Pathway description
PI3K Cascade
PIP3 activates AKT signaling
Signaling by activated point mutants of FGFR1
Signaling by activated point mutants of FGFR3
FGFR4 ligand binding and activation
FGFR3b ligand binding and activation
FGFR3c ligand binding and activation
FGFR1c ligand binding and activation
FGFR2c ligand binding and activation
FGFR3 mutant receptor activation
Activated point mutants of FGFR2
Constitutive Signaling by Aberrant PI3K in Cancer
Phospholipase C-mediated cascade: FGFR1
Phospholipase C-mediated cascade; FGFR2
Phospholipase C-mediated cascade; FGFR3
Phospholipase C-mediated cascade; FGFR4
Downstream signaling of activated FGFR1
SHC-mediated cascade:FGFR1
PI-3K cascade:FGFR1
FRS-mediated FGFR1 signaling
PI-3K cascade:FGFR2
SHC-mediated cascade:FGFR2
FRS-mediated FGFR2 signaling
SHC-mediated cascade:FGFR3
FRS-mediated FGFR3 signaling
PI-3K cascade:FGFR3
FRS-mediated FGFR4 signaling
SHC-mediated cascade:FGFR4
PI-3K cascade:FGFR4
Negative regulation of FGFR1 signaling
Negative regulation of FGFR2 signaling
Negative regulation of FGFR3 signaling
Negative regulation of FGFR4 signaling
Signaling by FGFR2 in disease
Signaling by FGFR1 in disease
RAF/MAP kinase cascade
PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling
Signaling by FGFR3 point mutants in cancer


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000324 Facial asymmetry 
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 HP:0000405 Hearing loss, conductive 
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 HP:0001156 Brachydactyly 
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001440 Synostosis involving metatarsal bones 
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 HP:0001597 Abnormality of the nails "Abnormality of the fingernails or toenails." [HPO:curators]
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 HP:0002967 Cubitus valgus 
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 HP:0003041 Radiohumeral synostosis "An abnormal osseous union (fusion) between the radius and the humerus." [HPO:curators]
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 HP:0004279 Hypoplastic hand 
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 HP:0006064 Limited interphalangeal movement 
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 HP:0007598 Bilateral single palmar creases 
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 HP:0009701 Synostosis involving the metacarpal bones "Fusion involving two or more metacarpal bones (A synostosis of the first metacarpal and the proximal phalanx of the thumb can also be observed, note that the first metacarpal bone corresponds to a proximal phalanx)." [HPO:curators]
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 HP:0009773 Symphalangism affecting the phalanges of the hand "Fusion of two or more phalangeal bones of the hand." [HPO:curators]
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 HP:0010579 Cone-shaped epiphyses 
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 HP:0011304 Broad thumb "Increased thumb width without increased dorso-ventral dimension." [pmid:19125433]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000111241 FGF6 / P10767 / fibroblast growth factor 6  / complex / reaction
 ENSG00000138685 FGF2 / P09038 / fibroblast growth factor 2  / complex / reaction
 ENSG00000066468 FGFR2 / P21802 / fibroblast growth factor receptor 2  / reaction / complex
 ENSG00000102678 FGF9 / P31371 / fibroblast growth factor 9  / reaction / complex






 

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