ENSG00000113248


Homo sapiens

Features
Gene ID: ENSG00000113248
  
Biological name :PCDHB15
  
Synonyms : PCDHB15 / protocadherin beta 15 / Q9Y5E8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q31.3
Gene start: 141245349
Gene end: 141249365
  
Corresponding Affymetrix probe sets: 231789_at (Human Genome U133 Plus 2.0 Array)   240445_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000231173
Ensembl peptide - ENSP00000485504
NCBI entrez gene - 56121     See in Manteia.
OMIM - 606341
RefSeq - NM_018935
RefSeq Peptide - NP_061758
swissprot - A0A096LPC0
swissprot - Q9Y5E8
Ensembl - ENSG00000113248
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh1g2ENSDARG00000101232Danio rerio
 pcdh1gb2ENSDARG00000101307Danio rerio
 pcdh1gb9ENSDARG00000088475Danio rerio
 pcdh2g5ENSDARG00000098788Danio rerio
 PCDHB15ENSDARG00000101338Danio rerio
 ENSGALG00000044463Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9Y5H1 / PCDHGA2 / protocadherin gamma subfamily A, 2ENSG0000008185347
Q9Y5G7 / PCDHGA6 / protocadherin gamma subfamily A, 6ENSG0000025373147
Q9Y5H3 / PCDHGA10 / protocadherin gamma subfamily A, 10ENSG0000025384646
Q9Y5G6 / PCDHGA7 / protocadherin gamma subfamily A, 7ENSG0000025353746
Q9Y5H0 / PCDHGA3 / protocadherin gamma subfamily A, 3ENSG0000025424546
Q9Y5G8 / PCDHGA5 / protocadherin gamma subfamily A, 5ENSG0000025348546
O60330 / PCDHGA12 / protocadherin gamma subfamily A, 12ENSG0000025315946
Q9Y5G9 / PCDHGA4 / protocadherin gamma subfamily A, 4ENSG0000026257646
Q9Y5G5 / PCDHGA8 / protocadherin gamma subfamily A, 8ENSG0000025376745
Q9Y5H2 / PCDHGA11 / protocadherin gamma subfamily A, 11ENSG0000025387345
PCDH10 / Q9P2E7 / protocadherin 10ENSG0000013865043
O14917 / PCDH17 / protocadherin 17ENSG0000011894634
PCDH19 / Q8TAB3 / protocadherin 19ENSG0000016519433
PCDH8 / O95206 / protocadherin 8ENSG0000013609933
PCDH12 / Q9NPG4 / protocadherin 12ENSG0000011355532
PCDH18 / Q9HCL0 / protocadherin 18ENSG0000018918432


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR030733  Protocadherin beta-15
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007268 chemical synaptic transmission IBA
 biological_processGO:0007399 nervous system development TAS
 biological_processGO:0007416 synapse assembly IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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