ENSG00000253485


Homo sapiens

Features
Gene ID: ENSG00000253485
  
Biological name :PCDHGA5
  
Synonyms : PCDHGA5 / protocadherin gamma subfamily A, 5 / Q9Y5G8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q31.3
Gene start: 141364232
Gene end: 141512979
  
Corresponding Affymetrix probe sets: 205717_x_at (Human Genome U133 Plus 2.0 Array)   209079_x_at (Human Genome U133 Plus 2.0 Array)   211066_x_at (Human Genome U133 Plus 2.0 Array)   211876_x_at (Human Genome U133 Plus 2.0 Array)   215836_s_at (Human Genome U133 Plus 2.0 Array)   216352_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000429834
Ensembl peptide - ENSP00000480337
NCBI entrez gene - 56110     See in Manteia.
OMIM - 606292
RefSeq - NM_018918
RefSeq - NM_032054
RefSeq Peptide - NP_061741
RefSeq Peptide - NP_114443
swissprot - Q9Y5G8
Ensembl - ENSG00000253485
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000041692Gallus gallus
 ENSGALG00000042230Gallus gallus
 ENSGALG00000036159Gallus gallus
 ENSGALG00000041947Gallus gallus
 ENSGALG00000041601Gallus gallus
 ENSGALG00000029700Gallus gallus
 ENSGALG00000041306Gallus gallus
 Pcdhga5ENSMUSG00000103567Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9Y5G9 / PCDHGA4 / protocadherin gamma subfamily A, 4ENSG0000026257677
Q9Y5G7 / PCDHGA6 / protocadherin gamma subfamily A, 6ENSG0000025373176
Q9Y5G6 / PCDHGA7 / protocadherin gamma subfamily A, 7ENSG0000025353775
Q9Y5H0 / PCDHGA3 / protocadherin gamma subfamily A, 3ENSG0000025424575
Q9Y5H1 / PCDHGA2 / protocadherin gamma subfamily A, 2ENSG0000008185375
Q9Y5H3 / PCDHGA10 / protocadherin gamma subfamily A, 10ENSG0000025384675
O60330 / PCDHGA12 / protocadherin gamma subfamily A, 12ENSG0000025315974
Q9Y5G5 / PCDHGA8 / protocadherin gamma subfamily A, 8ENSG0000025376774
Q9Y5H2 / PCDHGA11 / protocadherin gamma subfamily A, 11ENSG0000025387373
PCDH10 / Q9P2E7 / protocadherin 10ENSG0000013865039
Q9Y5E8 / PCDHB15 / protocadherin beta 15ENSG0000011324839
O14917 / PCDH17 / protocadherin 17ENSG0000011894633
PCDH18 / Q9HCL0 / protocadherin 18ENSG0000018918431
PCDH19 / Q8TAB3 / protocadherin 19ENSG0000016519431
PCDH8 / O95206 / protocadherin 8ENSG0000013609929
PCDH12 / Q9NPG4 / protocadherin 12ENSG0000011355529


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR031904  Cadherin, C-terminal catenin-binding domain
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0007399 nervous system development IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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