ENSG00000136099


Homo sapiens

Features
Gene ID: ENSG00000136099
  
Biological name :PCDH8
  
Synonyms : O95206 / PCDH8 / protocadherin 8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: -1
Band: q14.3
Gene start: 52842889
Gene end: 52848641
  
Corresponding Affymetrix probe sets: 206935_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000367177
Ensembl peptide - ENSP00000341350
NCBI entrez gene - 5100     See in Manteia.
OMIM - 603580
RefSeq - NM_002590
RefSeq - NM_032949
RefSeq Peptide - NP_002581
RefSeq Peptide - NP_116567
swissprot - O95206
swissprot - A0A024QZ94
Ensembl - ENSG00000136099
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh8ENSDARG00000006467Danio rerio
 PCDH8ENSDARG00000102185Danio rerio
 PCDH8ENSGALG00000036258Gallus gallus
 Pcdh8ENSMUSG00000036422Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PCDH18 / Q9HCL0 / protocadherin 18ENSG0000018918435
O14917 / PCDH17 / protocadherin 17ENSG0000011894632
PCDH19 / Q8TAB3 / protocadherin 19ENSG0000016519431
PCDH10 / Q9P2E7 / protocadherin 10ENSG0000013865030
PCDH12 / Q9NPG4 / protocadherin 12ENSG0000011355527
O60330 / PCDHGA12 / protocadherin gamma subfamily A, 12ENSG0000025315926
Q9Y5G7 / PCDHGA6 / protocadherin gamma subfamily A, 6ENSG0000025373125
Q9Y5G8 / PCDHGA5 / protocadherin gamma subfamily A, 5ENSG0000025348525
Q9Y5H0 / PCDHGA3 / protocadherin gamma subfamily A, 3ENSG0000025424525
Q9Y5G9 / PCDHGA4 / protocadherin gamma subfamily A, 4ENSG0000026257625
Q9Y5H1 / PCDHGA2 / protocadherin gamma subfamily A, 2ENSG0000008185325
Q9Y5G5 / PCDHGA8 / protocadherin gamma subfamily A, 8ENSG0000025376724
Q9Y5H2 / PCDHGA11 / protocadherin gamma subfamily A, 11ENSG0000025387324
Q9Y5G6 / PCDHGA7 / protocadherin gamma subfamily A, 7ENSG0000025353724
Q9Y5H3 / PCDHGA10 / protocadherin gamma subfamily A, 10ENSG0000025384624
Q9Y5E8 / PCDHB15 / protocadherin beta 15ENSG0000011324824


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR030711  Protocadherin-8


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001756 somitogenesis IEA
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007267 cell-cell signaling TAS
 biological_processGO:0007268 chemical synaptic transmission IEA
 biological_processGO:0007399 nervous system development IBA
 biological_processGO:0016331 morphogenesis of embryonic epithelium IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0042734 presynaptic membrane IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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