ENSMUSG00000036422


Mus musculus

Features
Gene ID: ENSMUSG00000036422
  
Biological name :Pcdh8
  
Synonyms : Pcdh8 / Protocadherin-8 / Q7TSK3
  
Possible biological names infered from orthology : O95206
  
Species: Mus musculus
  
Chr. number: 14
Strand: -1
Band: D3
Gene start: 79766775
Gene end: 79771312
  
Corresponding Affymetrix probe sets: 10421863 (MoGene1.0st)   1417051_at (Mouse Genome 430 2.0 Array)   1447825_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000045333
Ensembl peptide - ENSMUSP00000141417
NCBI entrez gene - 18530     See in Manteia.
MGI - MGI:1306800
RefSeq - NM_001042726
RefSeq - NM_021543
RefSeq Peptide - NP_001036191
RefSeq Peptide - NP_067518
swissprot - Q7TSK3
Ensembl - ENSMUSG00000036422
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh8ENSDARG00000006467Danio rerio
 PCDH8ENSDARG00000102185Danio rerio
 PCDH8ENSGALG00000036258Gallus gallus
 PCDH8ENSG00000136099Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcdh18 / Q8VHR0 / Protocadherin 18 / Q9HCL0*ENSMUSG0000003789234
Pcdh19 / Q80TF3 / Protocadherin-19 / Q8TAB3*ENSMUSG0000005132331
Pcdh17 / protocadherin 17 / O14917*ENSMUSG0000003556631
Pcdh10 / protocadherin 10 / Q9P2E7*ENSMUSG0000004910030
Pcdhac2ENSMUSG0000010269727
O55134 / Pcdh12 / Protocadherin-12 / Q9NPG4*ENSMUSG0000002444027
Pcdha2 / protocadherin alpha 2ENSMUSG0000010414827
Pcdha3 / protocadherin alpha 3ENSMUSG0000010231226
Pcdhga10 / protocadherin gamma subfamily A, 10 / Q9Y5H3*ENSMUSG0000010222226
Pcdhga7 / protocadherin gamma subfamily A, 7 / Q9Y5G6*ENSMUSG0000010347226
Q91XY4 / Pcdhga4 / Protocadherin gamma-A4 / Q9Y5G9* / protocadherin gamma subfamily A, 4*ENSMUSG0000010367725
Pcdhga5 / protocadherin gamma subfamily A, 5 / Q9Y5G8*ENSMUSG0000010356725
Pcdhga8 / protocadherin gamma subfamily A, 8 / Q9Y5G5*ENSMUSG0000010389725
Pcdhga3 / protocadherin gamma subfamily A, 3 / Q9Y5H0*ENSMUSG0000010434624
Pcdhga6 / protocadherin gamma subfamily A, 6 / Q9Y5G7*ENSMUSG0000010379324
Pcdhga11 / protocadherin gamma subfamily A, 11 / Q9Y5H2*ENSMUSG0000010274224


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR030711  Protocadherin-8


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001756 somitogenesis IMP
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0007268 chemical synaptic transmission IEA
 biological_processGO:0007399 nervous system development IBA
 biological_processGO:0016331 morphogenesis of embryonic epithelium IMP
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0042734 presynaptic membrane IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Msntm1Sts/Y
Genetic Background: involves: 129S4/SvJae * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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